Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0708 ATGTTAATGAAGGATCCACACCTTTTTCGGCTGTCGCTCATGGTAGAGTTTGAGGATGGAGATGGAGACATTGGCTCTATGCATATTCAAGAAGCAGGGTCAAGTGAGTGGCTTCAGATGAATCATCTGTGGGGTGCAAATTGGAACATTATTGGAGGGCCAATGAAGGGACCCTCCTCTGTGAAATTAAGCACATCAACTGGGAAAACACTTTCTGCAAGAGATATAAGAGCAGTTGAAACTATCATCAAGAAGGTTGGTGAGGAAGGTGAATGGTGGACACAGGAATACTGTGAGGCTGTGTTATAA 309 0.4401 MLMKDPHLFRLSLMVEFEDGDGDIGSMHIQEAGSSEWLQMNHLWGANWNIIGGPMKGPSSVKLSTSTGKTLSARDIRAVETIIKKVGEEGEWWTQEYCEAVL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0708 102 SUPERFAMILY PHL pollen allergen 10 76 IPR036749 -
Acco08g0708 102 Pfam Expansin C-terminal domain 10 76 IPR007117 -
Acco08g0708 102 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 9 76 IPR007117 -
Acco08g0708 102 Gene3D - 4 87 IPR036749 -
Acco08g0708 102 PANTHER EXPANSIN-B3 10 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0708 Acco-ChrAcco08 6289884 6291741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0708 11 76 Expansin Gene Family AT1G65680 31.884 1.92e-08 48.5