Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0704 ATGGCTCAATCCACAAAGCCAAGGGAAATCAGGACCAGAGAGGCAGAGACACATGTTTCAGAGGTTGAAGAGATCGATAGAGAAATCATTAGCGTTGATTCACCTATCAAGAAATTGTTGTTCAAGCCAACAAGTACTTGTTTTCTGCGAGAATCTAAAGAAGCTGATGCTTCTGCAATAATTTCTACTGTTCAGAAATATCTACCTTATATTCAGATGGAGAATGCACAGAACTCATCCAAGCTCCTTCCTGGTTTAAAAGACACAAGAGAATTGGTAGCATATGATGATGACATAGAGAAATCTGAGTTTTCCGCATCAAAAAACGGATCCTTTCATGACAAAAGGGTCCTCAGAGACTTCTTAGACTCTTGTACTCTGTTTATTTTGATCAGCTTCTTCATCCATCTTCTTCCTCTGCGCACAAACACCCAAAAGGTCTCTGTTTCTGAGATGGATAGATTCACTAATGGAATTGATGACTCGAGCTCTGAGAGGCAACAATGGAAGCCAGTTTATGATGAAGCCTCCAAGCCAATGTATCAAACCTTTACTTCTGTTTCATCGTCTTCTTCACGTATCACGTTTCCTTTTGCACTTGATGAGTCTCCCTACCAATCCGCAGCCACAAATCTTCAACCCTTGAATTCTTTAGCACCTGATCATCATCAGCAGCAGCAGCAGTGTCTTTGGCCGCTACACACAACAAAGCTATACAGGGGAGTGAGGCAACGCCATTGGGGCAAATGGGTGGCTGAGATTCGTCTTCCAAACAGTAGAAATCGCCTCTGGTTAGGAACATTTGACACAGCAGAAGATGCTGCTCTGGCTTATGATCGTGAGGCCTTTAAGCTCAGAGGACACAATGCTAAGCTCAATTTCCCTCACCTATTTCTCAGTAAACCTCCAGATTCAAATGATTCGTCTTCTTTCTCATCAAAACAGCCTGAACCAGAAGAAGAGAATCATGAATTTCAGGAAACTGCTAGAGGTAATAAAACAGGGGAAGGTGTTGCTGAGGCAGGGGAATTGGTTTCAGGGGACATGGAGGCTTGGTACGAGGCGATTCCACAAGGCTGGGGACCTGAGAGCCCCGTGTGGGATGATTTAGACGCCGCAAACAATCTTCTGTTTCAGTCATCATTACAGTTTGGTTTTGTGGACCCAAATTACCAGCAAGAGTTTCATGATGTTAATAATAATGCTCAGGGACAAGAAGACAAGACAGGAACAGATTTTAGTTGTTCCGCTTCCTCCTCTGCTTGTCTCATGAAGCCTTTCTTTTGGAAGGATTAA 1296 0.4329 MAQSTKPREIRTREAETHVSEVEEIDREIISVDSPIKKLLFKPTSTCFLRESKEADASAIISTVQKYLPYIQMENAQNSSKLLPGLKDTRELVAYDDDIEKSEFSASKNGSFHDKRVLRDFLDSCTLFILISFFIHLLPLRTNTQKVSVSEMDRFTNGIDDSSSERQQWKPVYDEASKPMYQTFTSVSSSSSRITFPFALDESPYQSAATNLQPLNSLAPDHHQQQQQCLWPLHTTKLYRGVRQRHWGKWVAEIRLPNSRNRLWLGTFDTAEDAALAYDREAFKLRGHNAKLNFPHLFLSKPPDSNDSSSFSSKQPEPEEENHEFQETARGNKTGEGVAEAGELVSGDMEAWYEAIPQGWGPESPVWDDLDAANNLLFQSSLQFGFVDPNYQQEFHDVNNNAQGQEDKTGTDFSCSASSSACLMKPFFWKD 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0704 431 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 165 370 - -
Acco08g0704 431 MobiDBLite consensus disorder prediction 298 336 - -
Acco08g0704 431 Pfam AP2 domain 239 288 IPR001471 GO:0003700|GO:0006355
Acco08g0704 431 SUPERFAMILY DNA-binding domain 238 296 IPR016177 GO:0003677
Acco08g0704 431 PRINTS Ethylene responsive element binding protein signature 239 250 IPR001471 GO:0003700|GO:0006355
Acco08g0704 431 PRINTS Ethylene responsive element binding protein signature 261 277 IPR001471 GO:0003700|GO:0006355
Acco08g0704 431 SMART rav1_2 238 301 IPR001471 GO:0003700|GO:0006355
Acco08g0704 431 CDD AP2 237 297 IPR001471 GO:0003700|GO:0006355
Acco08g0704 431 FunFam Ethylene-responsive transcription factor 2 237 296 - -
Acco08g0704 431 Gene3D AP2/ERF domain 238 296 IPR036955 GO:0003700|GO:0006355
Acco08g0704 431 ProSiteProfiles AP2/ERF domain profile. 238 295 IPR001471 GO:0003700|GO:0006355
Acco08g0704 431 MobiDBLite consensus disorder prediction 314 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0704 Acco-ChrAcco08 6266187 6273475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0704 152 371 AP2-EREBP Transcription Factor Family AT4G28140 44.934 6.29e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco08g0704 AP2 5.1e-13 CL0081