Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0670 ATGGATTCTACTGACGTGCAACCAATGAAAGTAGAGGATAGCTTCGAAGGTCGGAAGTGTACGCGTTGGCAAGGAGCGTGGCACGGTGCTTTCACCATTTACTGTGGACACTACGAAGGAGATATTCAATTTTCTCTCTTGCTTCATTTTAGTTCATTTTTCCAGCATTTGCCGAAATTTCCAGCTCCTCACTTCCTCTGCGAGTTCACTTTGATCTTGGATTCCGTCCTCACACTTCAGTCATCTTCGCTGGAGAAGATTGAACTGAGCCGGGGATCAATGGGTGGGATGAGATCTGCTTTTGAGTTTAAAGGAGCGAAGATACATGGACAAGTTTTATTGGGTTTCATGTTGATCTGTACGATTCAGTTTTCACAAGCGGAAACGAATCCAACTGACGTTTCTGCAATAAATAACTTATATGCTGCGCTGGGCTTCCCTGTTCTCCCTGGGTGGGTACCAAGTGGGGGAGACCCTTGTGGACAAGCATGGCAGGGCATTCAGTGTAATGGTTCAGATATACAGACAATAGTTCTGGTTGGTGCAAATTTGGGAGGCGAACTGGGTAACAGCTTGGGAACGTTTGCTTCTCTAAAAAAAATAGATCTAAGCAACAACCACATTGGAGGAAGTATTCCATCCAGCTTGCCTGTCTCCTTGCAAAATTTTTTTCTTTCAGGTAACCAGTTCACTGGAAGTATTCCAACCTCTTTATCTACATTGACTGAACTGACAGTCATATCTTTTAATGAGAATCAATTATCAGGAGCAATCCCGGATGTATTTCAATCACTTACAAAATTGGTTAATCTAGATTTATCAAATAACAATTTTAGTGGGGAGCTGCCTCCATCTGCAGAGAATTTGTCAGCTTTGGTCTCCCTACATCTGCAGAGCAATCAACTATCTGGGACCCTTGATGTTTTACAAGACCTTCCACTGAAAGATTTGAATGTAGAGAACAACCAATTCAATGGACCAATTCCTCAAAAGCTTCTAAGCATCCCAAACTTCAGAAAAGATGGAAACCCGTTTAATGTTAATGGCACTACGGCTTCAGCCCCTCCATCGCGTTCTCCAGCAACACCACCACCAGGAACTGTGATTGCTGGGGCCCCAACTACTGGGCATGTACCTAGTACTACTAAACCGGCTGAAGGACCAACTACATCAAAGGAATCAAACTCTGGAAAAGCAAAAAAGGACACCAAACGGGTGGTTTGGATATCTATTGCAAGCGTATTAGGATTTATTATCTTAGTGTTGGCACTACTTCTCTTTACTCCAAGATGTAGAAGAAGGGAAAGAGTTGGCAGAATTTCTAAGCAACACCAAATTGGAGCATATGGAGACGACAGACACAATCATAGGAATCATGTGACTTCAGTCCAACCACCGAGTCAAACTGAGGAAGTACCAAAGGGGGCTGTTAGAACAAAAGAAGATCGTCAAGCAGAGACCAGGAGAGTAGAAGCTATTCCCAGGTCAAAAGATGATCAAGAGAAAGATGTGCGAAGGATGGGAAGTTTACCCAAGCCGGATGACCATGAGATAGATATGAGCGCAATGGATGTGTACTCATTGCCACCCCCTCCTCCTCCCCCACCCCCGCCCCCACCCCCACCCCCACCACCACCTAATGAGGAGGTGACTGCTCAGCCAATTCCTTTCCCTCGAGGAGCTACAGTCAATCCTTCTGTTAAAAAGCCAGTTTCTCCCACTTTTGCAAAATCTTTCACCATTGCATCCCTTCAACAGTATACGAACAGCTTTTCTCAAGATAACCTTCTAGGAGGAGGCATGCTGGGGAGTGTATATAGGGCAGAGCTACCTGATGGGAAGCTACTTGCTGTGAAGAAACTGGAAAAAAGAGTTTCTGAACATCAAAAGGATCATGAATTTCTTGAATTGGTAAACAGTATTGACCGAATCAGGCATGCAAATATTGTTGAGCTTATTGGTTTCTGTGCTGAGCATGGCCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCATTGCATGATGCACTAAATTTAGATGACGAGTTCAAAACAAGATTGTCATGGAATGCTCGCATTCGGATAGCCCTTGGGGCAGCCAGAGCCTTAGAGTATTTGCATGAGATCTGCCAACCACCAGTTGTACACAGAAATTTCAAGGCTACCAATATTCTCCTTGATGATGATCTATCAGTGCGTGTTTCAGATTGTGGTTTGGCTCCCTTGATAGCTTCAGGTTCTGTAAGTCAGCTCTCAGGGCAACTGCTTACAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCTGGAATTTACACACACCAGAGTGATGTGTACAGTTTTGGAGTGGTTATGTTAGAACTATTGACAGGCCGCCAATCCTATGACAGGACACGTTCTCGAGGCGAGCAATCTCTAGTTAGATGGGCAATTCCCCAACTGCATGACATTGATGCCTTATCAAATATGGTAGATCCTTCTCTCAATCGAGACTACCCAGCCAAATCATTGTCAAACTTCGCAGACATTATTTCTCAATGTGTTCAGTCGGAGCCGGAATTTAGGCCACCTATGTCAGAGGTTGTTCAATATCTACTAGACATGGTAAGGAAGGAATCTCACAGAAATGGATCAAATGAAGAATGA 2646 0.441 MDSTDVQPMKVEDSFEGRKCTRWQGAWHGAFTIYCGHYEGDIQFSLLLHFSSFFQHLPKFPAPHFLCEFTLILDSVLTLQSSSLEKIELSRGSMGGMRSAFEFKGAKIHGQVLLGFMLICTIQFSQAETNPTDVSAINNLYAALGFPVLPGWVPSGGDPCGQAWQGIQCNGSDIQTIVLVGANLGGELGNSLGTFASLKKIDLSNNHIGGSIPSSLPVSLQNFFLSGNQFTGSIPTSLSTLTELTVISFNENQLSGAIPDVFQSLTKLVNLDLSNNNFSGELPPSAENLSALVSLHLQSNQLSGTLDVLQDLPLKDLNVENNQFNGPIPQKLLSIPNFRKDGNPFNVNGTTASAPPSRSPATPPPGTVIAGAPTTGHVPSTTKPAEGPTTSKESNSGKAKKDTKRVVWISIASVLGFIILVLALLLFTPRCRRRERVGRISKQHQIGAYGDDRHNHRNHVTSVQPPSQTEEVPKGAVRTKEDRQAETRRVEAIPRSKDDQEKDVRRMGSLPKPDDHEIDMSAMDVYSLPPPPPPPPPPPPPPPPPPNEEVTAQPIPFPRGATVNPSVKKPVSPTFAKSFTIASLQQYTNSFSQDNLLGGGMLGSVYRAELPDGKLLAVKKLEKRVSEHQKDHEFLELVNSIDRIRHANIVELIGFCAEHGQRLLIYEYCSNGSLHDALNLDDEFKTRLSWNARIRIALGAARALEYLHEICQPPVVHRNFKATNILLDDDLSVRVSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFESGIYTHQSDVYSFGVVMLELLTGRQSYDRTRSRGEQSLVRWAIPQLHDIDALSNMVDPSLNRDYPAKSLSNFADIISQCVQSEPEFRPPMSEVVQYLLDMVRKESHRNGSNEE 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0670 881 Gene3D Phosphorylase Kinase; domain 1 562 668 - -
Acco08g0670 881 ProSiteProfiles Protein kinase domain profile. 591 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0670 881 Pfam Protein tyrosine and serine/threonine kinase 594 865 IPR001245 GO:0004672|GO:0006468
Acco08g0670 881 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 170 865 - -
Acco08g0670 881 Gene3D Ribonuclease Inhibitor 138 240 IPR032675 -
Acco08g0670 881 MobiDBLite consensus disorder prediction 344 402 - -
Acco08g0670 881 SUPERFAMILY L domain-like 129 337 - -
Acco08g0670 881 SUPERFAMILY Formin homology 2 domain (FH2 domain) 535 540 - -
Acco08g0670 881 Gene3D Transferase(Phosphotransferase) domain 1 669 881 - -
Acco08g0670 881 SUPERFAMILY Protein kinase-like (PK-like) 567 865 IPR011009 -
Acco08g0670 881 Pfam Leucine rich repeat 219 278 IPR001611 GO:0005515
Acco08g0670 881 MobiDBLite consensus disorder prediction 374 394 - -
Acco08g0670 881 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 559 668 - -
Acco08g0670 881 MobiDBLite consensus disorder prediction 474 521 - -
Acco08g0670 881 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 669 879 - -
Acco08g0670 881 MobiDBLite consensus disorder prediction 443 567 - -
Acco08g0670 881 Coils Coil 618 638 - -
Acco08g0670 881 Gene3D Ribonuclease Inhibitor 241 350 IPR032675 -
Acco08g0670 881 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 130 357 - -
Acco08g0670 881 MobiDBLite consensus disorder prediction 526 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0670 Acco-ChrAcco08 5898402 5905304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0670 124 877 Strubbelig Receptor Gene Family AT4G03390 61.518 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Acco08g0670 PK_Tyr_Ser-Thr 1e-43 CL0016