Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0652 ATGCGTTGGTCTTCTTTCTTCCAGACAGCCTCAAAGGCTTTTCATCAGTCTCCTTCCTGGTCCAAGGTTCTTGTCGTCTGCACTGTCAGTGGGGGAGGTTTAGTGGCATATGCTGATGCAAGAGCTGTTCAGAGTCAGAATGGTGAAGATAGATGCCTTAAGAAGAAGAAGGTGGTGGTGGTGGGGACAGGGTGGGCAGCCACCAGTTTTGTGAAGAATTTTAAAAATCCTTCGTATGATGTGGAAGTGGTTTCACCTCGTAACTATTTTGCATTTACGCCTTTGCTTCCAAGTGTCACTATCGGCACCGTGGAATCAAGAAGCATTGTTGAACCTATTCGCAGAATCATCAGAAAGAAGAATGTAAGCATGCAATTCACGCAAGCTGAATGTTATAAGATCGATGCCAAGAATCGAAAAGTGTACTGTCGTTCTCCTGAAGACAGCAAAAATGGCAAACGAGAATTTTCCATTGAATATGACTACCTCGTTCTAGCCATGGGAGCACGTTCCAACACGTTTAACACCCCGGGTGTTGAAGAGCACACTCACTTCTTGAAGGAAGTTGAAGATGCTCAGAGAATCCGCCGGAAAGTGATTGAACTTTTCGAAAAGGCAAGCCTGCCGTGTATACCTGAAGAGGAGAAGAAGAAACTTCTGCATTTTGTGGTGGTTGGTGGTGGTCCCACTGGTGTAGAGTTTGCTGCAGAGCTTCATGACCATGTTCATCATGATTTATACAAGCTATATCCTTCTGCCAAAGAACACCTAAAGATTACACTTTTAGAAGCAGGCGATCATATTCTGAACATGTTTGACAAGAGGATTACTGAGTTTGCTGAAGATAAGTTCAAAAGAGATGGGATAGATGTAAAACTAGGTTCTATGGTTGTAAAAGTGGCTGAGAATGAAATCAGTACAAAAGAAAGAGGATCTGGTAAGCTTGTATCTCTACCTTATGGAATGGTGGTTTGGTCAACTGGTATTGGTCCTCGTCCTGAAGCTGTTCAGTTTATGAAAGATATTGGTCAGGGTATTAGGCGTGCAATTAGCACTGATGAATGGTTAAGAGTGGAAGGGACTGACAATATCTATGCACTGGGAGATTGTGCCACTGTTAATCAACGGGGAGTTATGGAAGATATAGGAGTGATATTTAGCAAGGCAGACAAGGACAATAGTGGGAAACTAGATCTGGATCACTTTCAAGAGGTTGTTGGAGACATTATTGAGAGGTACCCACAAGTGGGTCTTTATCTAAAGAAGAAGCAAATGAGTGACATACTGGCACTATTGAAGAACCCTCTAGACAACAATGCTCTAATGGATATTGAAACATTCAAATCTTGTCTTGCCGAGGTAGATTCCCAGATGAAAAATCTTCCTGCAACAGCTCAGGTTGCTGCTCAACAAGGTCAGTATCTTGCAGACTGTTTCAATCGAATGGAGCAGTGTGAGGAATATCCTGAAGGACCCCTTAGGTTTAGAGGAACAGGACGTCATCGTTTCCGTCCCTTCAGGTACAAGCATTTGGGGCAATTTGCACCGTTGGGAGGAGAACAAGCAGCAGCACAGCTTCCAGGAGATTGGGTTTCAATCGGACAAAGCACCCAGTGGCTCTGGTATTCTGTCTATGCAAGCAAACAAGTGAGCTGGCGTACCAGGTATTTGGTGGTGACAGATTGGGGACGACGCTTCATTTTTGGCAATGACTCAAGTGGAATATGA 1728 0.4392 MRWSSFFQTASKAFHQSPSWSKVLVVCTVSGGGLVAYADARAVQSQNGEDRCLKKKKVVVVGTGWAATSFVKNFKNPSYDVEVVSPRNYFAFTPLLPSVTIGTVESRSIVEPIRRIIRKKNVSMQFTQAECYKIDAKNRKVYCRSPEDSKNGKREFSIEYDYLVLAMGARSNTFNTPGVEEHTHFLKEVEDAQRIRRKVIELFEKASLPCIPEEEKKKLLHFVVVGGGPTGVEFAAELHDHVHHDLYKLYPSAKEHLKITLLEAGDHILNMFDKRITEFAEDKFKRDGIDVKLGSMVVKVAENEISTKERGSGKLVSLPYGMVVWSTGIGPRPEAVQFMKDIGQGIRRAISTDEWLRVEGTDNIYALGDCATVNQRGVMEDIGVIFSKADKDNSGKLDLDHFQEVVGDIIERYPQVGLYLKKKQMSDILALLKNPLDNNALMDIETFKSCLAEVDSQMKNLPATAQVAAQQGQYLADCFNRMEQCEEYPEGPLRFRGTGRHRFRPFRYKHLGQFAPLGGEQAAAQLPGDWVSIGQSTQWLWYSVYASKQVSWRTRYLVVTDWGRRFIFGNDSSGI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0652 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 23 42 - -
Acco08g0652 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Acco08g0652 575 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Acco08g0652 575 PANTHER NADH DEHYDROGENASE 45 574 IPR045024 GO:0003954|GO:0006116
Acco08g0652 575 ProSiteProfiles EF-hand calcium-binding domain profile. 377 412 IPR002048 GO:0005509
Acco08g0652 575 Gene3D - 424 574 - -
Acco08g0652 575 Gene3D - 46 389 - -
Acco08g0652 575 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 379 IPR023753 GO:0016491
Acco08g0652 575 SUPERFAMILY FAD/NAD(P)-binding domain 55 273 IPR036188 -
Acco08g0652 575 SUPERFAMILY FAD/NAD(P)-binding domain 221 374 IPR036188 -
Acco08g0652 575 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 46 406 - -
Acco08g0652 575 SUPERFAMILY EF-hand 370 461 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0652 Acco-ChrAcco08 5798063 5801526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0652 1 575 Chloroplast and Mitochondria Gene Families AT4G21490 68.158 0.0 795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0652 08 5798063 5801526 Acco08g0652 08 5798063 5801526 ECH