Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0632 ATGACCTTCAACAAACACTCCCTCGACAGGTGCAAGCATGTTCTCCCAGGTCATCAGGCCTGGCATTCTCAATACTGGTTTCTGGCGATGATGAGAAGCAATGGATTAAAGAGGGGTGCGTGGAGTAAGGAAGAGGATGAAACGTTAAGAGAATATGTTGAGAGATACGGCCACAGTAATTGGCGTCAACTTCCCAAACACGCAGAAATACAAGTTGGGATGGATCTTGATGGGGTTTCAGCTGCAATAACGTACAGGTTTATCAAGAGTAGATGGTCTTCCATCGCCGAAAGATTGCCAGGGAGAAGTGACAATGAAATTAAGAACCATTGGCATAGTCACCTAAAGAAGATCTTGGAGCGCAACCATGCGGAAAAATCTGAGTTGAAAATGAAGGCTGGTGATAATAGTGAAGGAGAAGCAACAAAGTATCTGGAACCTGAAAACACTATGCTTGGTTTTGCTGATGCTTCCTCCAGTGATATTATCTCATCAGAAAATTCACCACAAATCTACAATTCATCTTCAAACTTTTCCTTCGGAAAAGGTGTTGCTAATGCCGCTGCATGCGAAATATTTGTAGAATTCGGCGATTTTTGGACCCAACCATTTCTCCCAGAAAATATATATGACCAAAATAACTATAATAGTCTGAACTATGCAGCAAATGAAGCATACGTGGATGAATGTTCCTCATACATCTTCGATAATGCTGAGTTTTTGTGCCACATTGTTGGTCAACTGAAGAAGGCTAGCTATGGATCGGATGGTTATTGGAGGATTGCCAAGAAATTAAAGCACCTAAATGCATTTGTATGCCTGTGCCTTGCTCTTGCTAATAGCTATGCCACTTCATCATATCGTTTGTGCTTTTGA 876 0.4167 MTFNKHSLDRCKHVLPGHQAWHSQYWFLAMMRSNGLKRGAWSKEEDETLREYVERYGHSNWRQLPKHAEIQVGMDLDGVSAAITYRFIKSRWSSIAERLPGRSDNEIKNHWHSHLKKILERNHAEKSELKMKAGDNSEGEATKYLEPENTMLGFADASSSDIISSENSPQIYNSSSNFSFGKGVANAAACEIFVEFGDFWTQPFLPENIYDQNNYNSLNYAANEAYVDECSSYIFDNAEFLCHIVGQLKKASYGSDGYWRIAKKLKHLNAFVCLCLALANSYATSSYRLCF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0632 291 Gene3D - 35 75 - -
Acco08g0632 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 90 179 - -
Acco08g0632 291 SUPERFAMILY Homeodomain-like 35 111 IPR009057 -
Acco08g0632 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 119 IPR017930 -
Acco08g0632 291 ProSiteProfiles Myb-like domain profile. 33 115 IPR001005 -
Acco08g0632 291 Pfam Myb-like DNA-binding domain 90 115 IPR001005 -
Acco08g0632 291 Pfam Myb-like DNA-binding domain 38 67 IPR001005 -
Acco08g0632 291 SMART sant 37 117 IPR001005 -
Acco08g0632 291 CDD SANT 40 115 IPR001005 -
Acco08g0632 291 Gene3D - 81 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0632 Acco-ChrAcco08 5639100 5642461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0632 35 171 MYB Transcription Factor Family AT2G31180 35.625 5.02e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco08g0632 Myb_DNA-binding 3.2e-07 CL0123