Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0631 ATGGCTGTTCAAGTGGTGATGATGAGAGGCCCTTACTATGACAGAAATGGAATAAAGAGAGGTGCTTGGAGCAAGGAAGAAGATGAAAGATTAAGAGCATATGTTGAGAGATACGGGCACAGTAATTGGCGTCAACTTCCCAAAAACGCAGGTTTATCAAGGTGGTCTCTAATTGCGGAAAGATTACCAGGGAGAAGTGACAACGAGATTAAGAACCACTGGCATAGCCACCTAAAGAAGCACTTGGAGCGCAATCACGGGGCAAAATCTGAGTTCAAAATGAAACGTAGTGGTGCTTGCAAAGGAGAAACTACAAAGTATTTCGAACCTGATGAAAACCCTTTGCTCGGTTTTGATTCTGCTTCCTCCAGCATTATCTCAGAAAGATCACCACCTAGGTACTGTTCATTATCAACCTTTGCCTTCGGAGATGAAATGTACGAAGATTTCGGAGATTTTTGGACGCAACCATTTGTCCCAGAGAACACGTACAAGCACGACTACGACTATTATAGTCTGAACTATGCAGCGGATGGAGCTGACGTGGACGAGTATTCGTCGTTCCTCTTGGATAATGCTGAGTTTTTGTGCCAAGTCATGCAAGAATTTCCGGAAAATCCTACAAAGGATATACTATAA 639 0.4319 MAVQVVMMRGPYYDRNGIKRGAWSKEEDERLRAYVERYGHSNWRQLPKNAGLSRWSLIAERLPGRSDNEIKNHWHSHLKKHLERNHGAKSEFKMKRSGACKGETTKYFEPDENPLLGFDSASSSIISERSPPRYCSLSTFAFGDEMYEDFGDFWTQPFVPENTYKHDYDYYSLNYAADGADVDEYSSFLLDNAEFLCQVMQEFPENPTKDIL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0631 212 ProSiteProfiles Myb-like domain profile. 15 78 IPR001005 -
Acco08g0631 212 CDD SANT 22 78 IPR001005 -
Acco08g0631 212 Gene3D - 18 84 - -
Acco08g0631 212 Pfam Myb-like DNA-binding domain 20 78 IPR001005 -
Acco08g0631 212 SUPERFAMILY Homeodomain-like 7 86 IPR009057 -
Acco08g0631 212 SMART sant 19 80 IPR001005 -
Acco08g0631 212 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 54 - -
Acco08g0631 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 82 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0631 Acco-ChrAcco08 5633138 5635567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0631 7 85 MYB Transcription Factor Family AT2G31180 41.176 3.12e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco08g0631 Myb_DNA-binding 5.2e-15 CL0123