Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0630 ATGTATAACATTTGCAAGAGTAGATGGTCTTCCATCGCCGAAAGATTGCCAGGGAGAAGTGACAACGAAATTAAGAACCATTGGCATAGCCACCTAAAGAAGATCTTGGAGCGCAACCATGCGGAAAAATCTGAGTTGATAACGAAGGCAGGTGATAATAGTGAAGGAGAAGCAACAAAGTATCTGGAAACTGAAAACACTCTGCTTGGTTTTGCTGCTGCTTCCTCCAGTGATATTATCTCATCAGAAAATTCACCACAAATCTACATTTCATCTTCAAACTTTTCCTTCGGAGGAGAAGGTGTTGCTAATGCCGCTGCATGCGAAATATTTGAAGAATTCGGCGATTTTTGGACCCAACCATTTCTCCCAGAAAATATATATGACCAAAATAACTATAATAGTCTGAACTATGCAGCAAATGAAGCATACGTGGATGAATGTTCCTCATACATCTTCGATAATGCTGAGTTTTTGTGCCACGTGATGCAAGGATTTCCAGAAGATCTAAATCACATTTCTTTCTTTCTTCTCCGTTCTCTTCAATCAAAACATACTTGTAGTGAGTATAGATCACTCCTGAGGCTGCAAACTGGTTTTGGAGAGATTGTTGGTCAACTGAAGAAGGCTAGCTATGGATCGGATGGTTATTGGAGGATTGCCAAGAAAGCACCTAAATGCATTTGTATGCCTATGCCTTGCGCTCTTGCTAATAGCTAG 720 0.4056 MYNICKSRWSSIAERLPGRSDNEIKNHWHSHLKKILERNHAEKSELITKAGDNSEGEATKYLETENTLLGFAAASSSDIISSENSPQIYISSSNFSFGGEGVANAAACEIFEEFGDFWTQPFLPENIYDQNNYNSLNYAANEAYVDECSSYIFDNAEFLCHVMQGFPEDLNHISFFLLRSLQSKHTCSEYRSLLRLQTGFGEIVGQLKKASYGSDGYWRIAKKAPKCICMPMPCALANS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0630 239 CDD SANT 8 32 IPR001005 -
Acco08g0630 239 SUPERFAMILY Homeodomain-like 5 41 IPR009057 -
Acco08g0630 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 36 IPR017930 -
Acco08g0630 239 ProSiteProfiles Myb-like domain profile. 1 32 IPR001005 -
Acco08g0630 239 Gene3D - 1 61 - -
Acco08g0630 239 Pfam Myb-like DNA-binding domain 7 32 IPR001005 -
Acco08g0630 239 PANTHER MYB DOMAIN PROTEIN 55 4 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0630 Acco-ChrAcco08 5610525 5611472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0630 1 145 MYB Transcription Factor Family AT3G23250 32.099 1.59e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco08g0630 Myb_DNA-binding 2.9e-07 CL0123