Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0628 ATGGTGAGAGGTCCTTCCTTCGACGCAAATGGAGTTAAGAAAGGTGCATGGGGTGAAGAAGAAGACCAGAAGCTCATTTCTTTTATTCAGACCCATGGCCATCCTAATTGGCGCCAACTTCCCAAGTTTGCAGGGTTGGCAAGATGTGGAAAGAGCTGCAGGCTTCGATGGATGAACTACCTGAGACCAAATCTGAAACGTGGCAATTATACTGCACAAGAGGAGGAAATCATCCTCAAACTACATGAACAACATGGAAATAAGTGGTCGCTGATTGCTGAGAAGTTACCTGGAAGAACAGACAACCATATAAAGAATCATTGGCACAGCCAACTCAAGAGGAGGTCGAGGGACAGAGAAAAGAGTAGCTCTTCTGAGGTGAAAGGCAAGAAGTCAGTCCGTCACAATAATATGACAAAGTATTCGTCAGAAGCTGATATTGTGAAAGTTGTGAATGAGTTGAGCAACATATTAGAAAGCTCGTCACCGGACTTTATGGAAACGACGTCGTCGGCCCTGGCCGAGCAAGACAACTACTCTCCTTCCTTGCCTTCCATTGATACAGAATCTACCACCACCAAAAATTCGCCCGAAGAATATAATAGCGTGGCTTTGCGGGAAGTTTATAAGTTCCAAGAATTTAGCGGCGATTTTTGGACCGAGCCGTTTGTATCAGAAGATATTTACAGTGAATATTGCTATCCAAATAATGGAGCCGCCGTAGACATATCTTCATATGATGGCGCACTCTTGTTTTTCTAA 762 0.4409 MVRGPSFDANGVKKGAWGEEEDQKLISFIQTHGHPNWRQLPKFAGLARCGKSCRLRWMNYLRPNLKRGNYTAQEEEIILKLHEQHGNKWSLIAEKLPGRTDNHIKNHWHSQLKRRSRDREKSSSSEVKGKKSVRHNNMTKYSSEADIVKVVNELSNILESSSPDFMETTSSALAEQDNYSPSLPSIDTESTTTKNSPEEYNSVALREVYKFQEFSGDFWTEPFVSEDIYSEYCYPNNGAAVDISSYDGALLFF 253
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0628 253 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco08g0628 253 CDD SANT 16 61 IPR001005 -
Acco08g0628 253 MobiDBLite consensus disorder prediction 166 197 - -
Acco08g0628 253 MobiDBLite consensus disorder prediction 102 133 - -
Acco08g0628 253 MobiDBLite consensus disorder prediction 102 138 - -
Acco08g0628 253 Gene3D - 69 143 - -
Acco08g0628 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco08g0628 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco08g0628 253 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco08g0628 253 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Acco08g0628 253 SMART sant 66 114 IPR001005 -
Acco08g0628 253 SMART sant 13 63 IPR001005 -
Acco08g0628 253 Gene3D - 7 67 - -
Acco08g0628 253 CDD SANT 69 109 IPR001005 -
Acco08g0628 253 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco08g0628 253 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Acco08g0628 253 FunFam MYB-related transcription factor 13 66 - -
Acco08g0628 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 196 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco08g0628 Acco-ChrAcco08 5485042 5486139 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0628 1 115 MYB Transcription Factor Family AT2G31180 65.217 1.84e-53 171
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco08g0628 Myb_DNA-binding 1.9e-13 CL0123