Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0627 ATGTATGATGGAGACATCTTTGATGGGTTTCGCGTGGTGCTTTACAGGTCCTCAGTCCTTCCTTCGACGCAAATGGAGTTAAGAAAGGTGCATGGAGTGAAGAAGAAGACTAGAAGCTCATTTCTTTTATTCAGACCCATGGCCATCCTAATTGGCGCCAACTTCCCAAGGTTGGCAAGATGTGGAAAGAGCTGCAGGCTTCGATGGATGAACTACCTGCGACCAAATCTGAAACGTGGCAACTATACTGCACAAGAGGAGGAAATCATCCTCAAACTACACGAACAACATGGAAATAAGTGGTCGCTGATTGCTGAGAAGTTACCTGGAAGAACAGACAACCATATAAAGAATCATTGGCACAGCCAACTCAAGAGGAGGTCGAGGGACAGAGAAAAGAGTAGCTCTTCTGAGGTGAAAGGCAAGAAGTCAGTCCGTCACAATAATATGACAAAGTATTCGTCAGAAGCTGATATTGTGAAAGTTGTGAATGAGTTGAGCAACATATTAGAAAGCTCGTCACCGGACTTTATGGAAACGACGACGTCGACCCTGGTCGAGCAAGACAACTACTCTCCTTCCTTGCCTTCCATTGATACAGAATCTACCACCACCAAAAATTCGCCAGAAGAATATAATAGCGTGGCTTTGCGGGAAGTTTATAAATTCCAAGAATTTAGCGGCGATTTTTGGACAGAGCCGTTTGTATCAGAAGATATTTACAGTGAATATTGCTATCCAAATAATGGAGCCGCCGTAGACATATTTTCATATGATAGCGCCCCCTTGTTTTTCTAA 798 0.4361 MYDGDIFDGFRVVLYRSSVLPSTQMELRKVHGVKKKTRSSFLLFRPMAILIGANFPRLARCGKSCRLRWMNYLRPNLKRGNYTAQEEEIILKLHEQHGNKWSLIAEKLPGRTDNHIKNHWHSQLKRRSRDREKSSSSEVKGKKSVRHNNMTKYSSEADIVKVVNELSNILESSSPDFMETTTSTLVEQDNYSPSLPSIDTESTTTKNSPEEYNSVALREVYKFQEFSGDFWTEPFVSEDIYSEYCYPNNGAAVDIFSYDSAPLFF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0627 265 Gene3D - 33 78 - -
Acco08g0627 265 Gene3D - 80 154 - -
Acco08g0627 265 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Acco08g0627 265 MobiDBLite consensus disorder prediction 114 150 - -
Acco08g0627 265 Pfam Myb-like DNA-binding domain 79 123 IPR001005 -
Acco08g0627 265 MobiDBLite consensus disorder prediction 114 145 - -
Acco08g0627 265 MobiDBLite consensus disorder prediction 188 209 - -
Acco08g0627 265 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 57 204 - -
Acco08g0627 265 SMART sant 78 126 IPR001005 -
Acco08g0627 265 CDD SANT 81 121 IPR001005 -
Acco08g0627 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Acco08g0627 265 SUPERFAMILY Homeodomain-like 59 132 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0627 Acco-ChrAcco08 5455422 5457122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0627 41 127 MYB Transcription Factor Family AT1G79180 64.368 2.07e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco08g0627 Myb_DNA-binding 4.3e-16 CL0123