Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0621 ATGACCACTGACCGGCGCGTATGCAAAAAGTCAAATATGTGGGCCAGAAAACTACGTTCTCTTTGTGAGGAGTTTCCTTCTCTCTCCATAGCTCTATCAGACCCTGACTTGAGCTATGGCGGCATAAGGAAACTTGTGCCATTAGTGACCAAAACATTCATTGGACGGTCAAACGCTATACTCTTAGATTCTGGGAATCTCGTCCTAAGAAAGCTAGAATCTTCAGAAAACTTATGGGAGAGTTTCGATAGCCCGACCCACATATTTCTTCCTGGTGGTAAAATCAAACTCAACAATAAGACAAAACAGCCTCAATATCTCACTTCCTGGAAGAACGTTGAAGATCCTGCGACGGGTCTTTTTTCTCTGGAGCTAGACCCGAAAGGAACCAACTCGTACTTAATTCTTTGGAACAAGTCTGAAGAGTACTGGACAAGTGGTCCTTGGAATGGCCAAACTTTCAGCTTGGTCCCTGAAATGAGGTTGGATTTCTTATACAATTTCACCTTTGTTTCAAATGAGAATGAGAGCTATTTCACTTACTCCATGTATAACACTTCTATTATATCTCATTTGGTGATGGATGTCTCGGGGCAAATCCAGCAACGCTCATGGCTTGAAAGCAACCAACAGTGGAATTTGTTTTGGGCACAGCCTAAACGACAATGTGAGGTTTATGCTTTCTGTGGAGCGTTTGGGAGCTGCAATGAGAATTCCCTGCCATTTTGTTCTTGCTTGACGGGTTTCGAGCCAAAGTCACAAACTGATTGGGATCTGCAGGATCACTCAGGTGGTTGTGTGAGAAGAACCAAGTTGCAATGTGAGAATACAAGTTCATCAAATAGTGAGAAAGATGGGTTTTTGGCGATGCCAAACGTGACCTTACCTATAAAGGCACAAAATGTGGAAGTAGGTAATGCCGGGGAATGTGAGTACACGTGCTTGAATGATTGCTCTTGCTCTGCGTATGCTTATGACAGAAATGCCTGCTTAATTTGGCATGGAGATTTAATAAATCTGCAACAATCTCCTAAAGATGACGGGTACGGAAAAACGTTATTTCTAAAACTTGCAGCTTCTAAGTTTCCAGATGCTAAACACAAAAAGCAAGAAATTATTGGTATTGTGGTAGGCTTGGTTGGAGGCATAGGGGTTCTCCTAGCAATTTGCCTCTTTGTGATGATGAGAATGAAAAAGAGAAGAGTTGGATTAGGAAGAACGGTGGCAAGTTCATCGATGGCATTTAGGCATTGTGGAGAAATTATTGGTATTGTGATGGGGATTATAGGTGGTTTAGGGGCTGTCCTGGCCATTCTACTATTTGTGATATTCAGAAGAAGACGACTTCTTGGAAAAGGAAAATCGGTGCAGGGTTCATTGGTGGCATTTGGAATCCTCACAACAATGCGAGGGACAAGAGGTTATCTTGCTCCAGAGTGGATTTCTGGAGTGGCTATCACACCAAAAGTTGATGTTTACGGTTATGGAATGATGCTATTCGAATTAGTGTCAGGAAGAAGAAACTTCGAGCCATCAAAAGATGGTCAAGTGAAGTTCTTCCCTACATGGGCTGCAAATGCAGTCATCCAAGGAGGCGATGTTCTTGAGCTTTTGGATCCTATATTAGAGAGGAAAGCAGACATTGAGGAGGTGACTAGGATAATAAAACTTGCTTCGTGGTGTGTACAAGATGAAGAGTCAAACAGGCCATCCATGTGTCAGATAGTTCCAATTCTTGAGGGATTTTTGGATATGAGTTTGCCTCCAATTCCAAGATCCCTCCTACTGTTTGTTGACACCTAG 1803 0.4265 MTTDRRVCKKSNMWARKLRSLCEEFPSLSIALSDPDLSYGGIRKLVPLVTKTFIGRSNAILLDSGNLVLRKLESSENLWESFDSPTHIFLPGGKIKLNNKTKQPQYLTSWKNVEDPATGLFSLELDPKGTNSYLILWNKSEEYWTSGPWNGQTFSLVPEMRLDFLYNFTFVSNENESYFTYSMYNTSIISHLVMDVSGQIQQRSWLESNQQWNLFWAQPKRQCEVYAFCGAFGSCNENSLPFCSCLTGFEPKSQTDWDLQDHSGGCVRRTKLQCENTSSSNSEKDGFLAMPNVTLPIKAQNVEVGNAGECEYTCLNDCSCSAYAYDRNACLIWHGDLINLQQSPKDDGYGKTLFLKLAASKFPDAKHKKQEIIGIVVGLVGGIGVLLAICLFVMMRMKKRRVGLGRTVASSSMAFRHCGEIIGIVMGIIGGLGAVLAILLFVIFRRRRLLGKGKSVQGSLVAFGILTTMRGTRGYLAPEWISGVAITPKVDVYGYGMMLFELVSGRRNFEPSKDGQVKFFPTWAANAVIQGGDVLELLDPILERKADIEEVTRIIKLASWCVQDEESNRPSMCQIVPILEGFLDMSLPPIPRSLLLFVDT 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0621 600 ProSiteProfiles PAN/Apple domain profile. 274 358 IPR003609 -
Acco08g0621 600 Pfam Protein kinase domain 466 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0621 600 Pfam PAN-like domain 281 340 IPR003609 -
Acco08g0621 600 Gene3D Transferase(Phosphotransferase) domain 1 447 586 - -
Acco08g0621 600 SUPERFAMILY Protein kinase-like (PK-like) 464 592 IPR011009 -
Acco08g0621 600 SMART ntp_6 282 357 IPR003609 -
Acco08g0621 600 Pfam D-mannose binding lectin 57 111 IPR001480 -
Acco08g0621 600 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 56 396 - -
Acco08g0621 600 Pfam S-locus glycoprotein domain 144 253 IPR000858 GO:0048544
Acco08g0621 600 CDD PAN_AP_plant 270 358 - -
Acco08g0621 600 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 150 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0621 Acco-ChrAcco08 5383773 5386624 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0621 465 589 Receptor kinase-like Gene Family AT5G20050 36.364 3.11e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco08g0621 Pkinase 1.6e-12 CL0016