Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0619 ATGAAGAACCTATGGTGCTTTCCCTCTATTCTTCTCCTCTGTTTCTCCTTTCACACCATACCTTCACTGGCTGCTGATTCCATCTCTGCAAATCAGATTCTTTCTGGGGATCAAACTATCATCTCATCAGGTGGTGTCTTCGAATTGGGTTTCTTCAAGCCAGGTAACGCCTCAAACTACTTCGTAGGAATCTGGTATCAAAAGGTCTCGACACAGACCATTGTTTGGGTCGCAAACAGAGACAGACCTGTTTCTGATAAAAATTTAGCCAAGTTAGTTATATCAAACGGTAATTTGGTTCTTCTCAACGAGTCCCAAATCCCAGTTTGGTCCACAAATTTGAACTCCACAACCTCCAAGTCTGTTGTTGCTGTACTCCTGGATTCTGGCAATCTCGTCCTAAGAGACAAGCCGGAATCTTCAGAAAACTTATGGCAGAGTTTTGATTACCCAACCGACACGTGGCTTCCTGGAGGTAAAATTAAACTTAACAATAAAACAAAGCAGCCTCAATATCTCACTTCATGGAAGAACAAAGAAGATCCTGCTCAGGGTCTCTTCTCCTTGGAGCTAGACCCGAAAGGAACCACCGCGTACTTTATTCTTTGGAACAAGTCTGAACAGTATTGGACAAGTGGTCCTTGGAATGGCCAAATTTTCAGCTTGGTCCCTGAAATGAGGGCGAATTTCTTATACAATTTCACCTTTATTTCAAACGAGAACGAGAGTTATTTCACTTACTCCATGTATAACTCTTCTATTATATCTCGTTTCGTGATGTCAATCTCGGGACAGATCCAGCAACTGTCATGGCTGGAAAGCAGCAAGCAGTGGAATTTGTTTTGGTCTCAACCAAGACGACAGTGTGAGGTATATGCTTTTTGTGGCGCATTTGGGAGCTGCAACGAGAATTCCCAGCCGTTTTGTACCTGCTTGACTGGTTTCCAGCCAAAGTCACAAACTGATTGGGATCTGCAGGATCAATCTGGTGGGTGTATGAGGAAAACCAAGTTGCAATGTGAGAATCCAAGTTCATCCAACACAGAGAAAGATAAGTTTTTGGTAATGCCAAACGTGGCCTTGCCTAAACATGCACAATCTGTGGGAGTAGGGAATGCTGGTGAATGTGAATCCACGTGCTTGAACAATTGTTCTTGTGCTGCTTATGCTTATAGCAGTAACGGTTGTTCTGTTTGGAATGGAGATTTATTAAGTTTGCAGCAACTTTCTCCAGATGACAGTAATGGCGAAACTTTCTATCTAAAACTTGCAGCTTCTGAGTTTCCTGACACTAAAAGGAAAAATGGAGAAATTATTGGTATTGTGGTGGGCGTTGTTGGTGGTTTAGGGGTTCTCCTGGCCATTCTGCTTTTTGTGATAATCAGAAGAAGGAGAAGAATTGTTGGGAAAGGAAAATCGGTGGAGGGTTCATTGACGGCATTTGGGTACAGAGATTTACAAAATGCAACCAAGAATTTCTCTGAAAAACTGGGAGGAGGAGGATTTGGTTCTGTTTTCAAAGGCACATTGGCGGATTCTAGTGTCATAGCAGTGAAGAAGCTTGAAAGCATAAGCCAAGGTGAGAAACAGTTTCGATCAGAAGTCAGTACTATTGGCACAGTCCAACATGTGAATCTTGTTCGCCTTCGTGGCTTCTGCTCTGAAGGCAATAGAAAGCTTCTGGTTTATGATTATATGCCAAATGGCTCATTGAATGCCCATCTGTTTCAAGAAACGAACTCCAAGAAATTGGAATGGAAATTAAGGTACCAAATTGCTCTTGGTATAGCCAGGGGACTAACTTACCTCCACGAGAAGTGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAAAACATTCTATTAGATTCTGAATTTTGCCCAAAAGTTGCAGACTTTGGCCTCGCAAAGTTAGTTGGAAGGGATTTCAGCAGAGTTCTCACAACCATGAGAGGGACGAGAGGTTACCTTGCCCCGGAGTGGATTTCTGGTGTTGCCATCACGGCTAAAGCTGATGTTTATAGCTACGGAATGATGCTTTTTGAATTTGTGTCAGGCAGGAGGAATTCTGAGGCATCTGAAGATGGTCAAGTGAAGTTCTTTCCTACATGGGCTGCAAATGTAGTAGTAAGTCAAGGAGCTGATGTTCTCGACCTTTTAGATCCTTCCTTGGAGCGAAATGCAGACATTGATGAGCTTACTAGGATAATAAAAATTGCCTCATGGTGTGTACAAGATGAAGAGAGTCACAGGCCTTCCATGGGTCAGATAGTTCAAATCCTTGAAGGTGTTTTGGATGTGAATTTGCCTCCGATTCCAAGATCCCTCAGTGTGTTTGTTGAAAACCAGGAGAACATAGTTTTCTTCACTGACTCGAGCTCCAACCAGAGTTCACAGCCAAGAAGCAACCCCTCAGCAACATCTGGTGAAGCCAAAAGCAACATCTCATCGTCAAGCTCCTAG 2466 0.4311 MKNLWCFPSILLLCFSFHTIPSLAADSISANQILSGDQTIISSGGVFELGFFKPGNASNYFVGIWYQKVSTQTIVWVANRDRPVSDKNLAKLVISNGNLVLLNESQIPVWSTNLNSTTSKSVVAVLLDSGNLVLRDKPESSENLWQSFDYPTDTWLPGGKIKLNNKTKQPQYLTSWKNKEDPAQGLFSLELDPKGTTAYFILWNKSEQYWTSGPWNGQIFSLVPEMRANFLYNFTFISNENESYFTYSMYNSSIISRFVMSISGQIQQLSWLESSKQWNLFWSQPRRQCEVYAFCGAFGSCNENSQPFCTCLTGFQPKSQTDWDLQDQSGGCMRKTKLQCENPSSSNTEKDKFLVMPNVALPKHAQSVGVGNAGECESTCLNNCSCAAYAYSSNGCSVWNGDLLSLQQLSPDDSNGETFYLKLAASEFPDTKRKNGEIIGIVVGVVGGLGVLLAILLFVIIRRRRRIVGKGKSVEGSLTAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLADSSVIAVKKLESISQGEKQFRSEVSTIGTVQHVNLVRLRGFCSEGNRKLLVYDYMPNGSLNAHLFQETNSKKLEWKLRYQIALGIARGLTYLHEKCRDCIIHCDIKPENILLDSEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEASEDGQVKFFPTWAANVVVSQGADVLDLLDPSLERNADIDELTRIIKIASWCVQDEESHRPSMGQIVQILEGVLDVNLPPIPRSLSVFVENQENIVFFTDSSSNQSSQPRSNPSATSGEAKSNISSSSS 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0619 821 Gene3D - 21 148 IPR036426 -
Acco08g0619 821 PANTHER OS07G0415500 PROTEIN 9 774 - -
Acco08g0619 821 CDD STKc_IRAK 497 764 - -
Acco08g0619 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 216 IPR036426 -
Acco08g0619 821 SMART blect_4 31 151 IPR001480 -
Acco08g0619 821 Gene3D Transferase(Phosphotransferase) domain 1 566 770 - -
Acco08g0619 821 SUPERFAMILY Hairpin loop containing domain-like 351 408 - -
Acco08g0619 821 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Acco08g0619 821 Pfam D-mannose binding lectin 73 177 IPR001480 -
Acco08g0619 821 Gene3D Phosphorylase Kinase; domain 1 459 565 - -
Acco08g0619 821 Pfam Protein kinase domain 494 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0619 821 FunFam Serine/threonine-protein kinase 566 770 - -
Acco08g0619 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Acco08g0619 821 MobiDBLite consensus disorder prediction 792 821 - -
Acco08g0619 821 CDD B_lectin 31 151 IPR001480 -
Acco08g0619 821 FunFam Serine/threonine-protein kinase 458 565 - -
Acco08g0619 821 SMART ntp_6 348 423 IPR003609 -
Acco08g0619 821 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Acco08g0619 821 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Acco08g0619 821 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Acco08g0619 821 SMART serkin_6 491 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0619 821 Pfam PAN-like domain 348 405 IPR003609 -
Acco08g0619 821 FunFam Serine/threonine-protein kinase 20 148 - -
Acco08g0619 821 ProSiteProfiles Protein kinase domain profile. 491 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0619 821 PIRSF SRK 1 816 IPR024171 GO:0004674
Acco08g0619 821 SUPERFAMILY Protein kinase-like (PK-like) 476 802 IPR011009 -
Acco08g0619 821 CDD PAN_AP_plant 336 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0619 Acco-ChrAcco08 5347741 5350206 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0619 449 772 Receptor kinase-like Gene Family AT5G20050 40.884 1.47e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco08g0619 Pkinase 1.4e-49 CL0016