Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0617 ATGAAGAACTGCGAACTGTGCAGGATGCCGGCGAGGACCTACTGTGAATCGGACCTTGCTAGTTTATGTTGGGACTGCGATGCCAAGGTTCACAGAGCTAATTTCTTGGTTGCCAGGCACTCCAGGACCCTTCTATGCCATGCGTGCCAATCTCCGACGCCGTGGAAAGCCTCCGGTGCTGTTCTCGGAAACACCGTTTCGGTTTGCCGGAGCTGTGACGGAGGAATGAACTTAAGCGGTGAGGACGGCGACGAAAGCGAGGGAGGCAATGACACCGAAATAAACTCGGATGACGACGACGACAACGCCATGCTTGACGGAAACAACGATGAAGACGCCGCCGGCGATGAGGTAGGCGGTGATGTGGAGGCGGATCATCAATTAATCCCTTTGTTCTCCACGACGCCCCCACCGCCGGAGAGTTCTTCGAGCAGCGATGAGTCTAATAATGGCAATAGAAATGCCTCTGAATTAGGAACAACAGCTTACTTGAAACGAAGGCGTGAAAATGCATCCAATTATGATTTCCAGGATGGTCAGGGCCCAACTGATGGCGGGTAA 561 0.5312 MKNCELCRMPARTYCESDLASLCWDCDAKVHRANFLVARHSRTLLCHACQSPTPWKASGAVLGNTVSVCRSCDGGMNLSGEDGDESEGGNDTEINSDDDDDNAMLDGNNDEDAAGDEVGGDVEADHQLIPLFSTTPPPPESSSSSDESNNGNRNASELGTTAYLKRRRENASNYDFQDGQGPTDGG 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0617 186 MobiDBLite consensus disorder prediction 84 118 - -
Acco08g0617 186 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 171 - -
Acco08g0617 186 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Acco08g0617 186 CDD Bbox1_BBX-like 4 45 - -
Acco08g0617 186 MobiDBLite consensus disorder prediction 138 159 - -
Acco08g0617 186 MobiDBLite consensus disorder prediction 77 186 - -
Acco08g0617 186 SMART bboxneu5 1 45 IPR000315 GO:0008270
Acco08g0617 186 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0617 Acco-ChrAcco08 5332843 5333557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0617 2 110 C2C2-CO-like Transcription Factor Family AT4G27310 54.054 2.31e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco08g0617 zf-B_box 4.2e-06 No_clan