Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0616 ATGCGTGTAGCTCTCCTTCCATCGTCGCCGGAAAAAAGTATCACAATGAGAATAATGATAGCCCTTGTTCTGTTTTATGCTTTTTTGCCATGTCTTCGCCTATCCTGCTTAGCTAGTGATACTTTGAAGATGGGTGAAAAGCTTCTTAACACTCGAGATGGCAGTGCCAATCTTGTGACAACAGGACAAAAACTGCGGTTTGAACTGGGTTTCTTTCCGCCTTCTGGAAGACCGAAGAGATACCTAGGAATTTGGTATCATAAGATAGAACCGCTAACAGTTGTCTGGGTTGCTAACAGAGACAATCCCATTCCTTCAAAAACTGCAAGTTTTCAAATTTCGCAGGATGGAAACCTCACTGTGAATGATACAGACGGAACAGTCTATTGGTCTTCCACACCTGCACAAGTATCTTCTCTCACCAACCTCACTGTGAAGCTTATGGATTCTGGCAACTTAATTCTAGGGGACGATCTATTACAATCTACCTACTGGCAAAGCTTCCAACACCCCACGGACACATTTTTGCCGGGCATGAAAATGGATAAAAATTTAGTCTTGAATTCTTGGAGAGGCCCTGATGATCCCAGCAGCGGGAACTACACGTTTACAGGTGGAAAAACAGGGGCTAGCAACTATACAATCTACATCAACCAGAACCAAGTTTACTGGGCAGGTGAAGATTTCAGCTCAGAAGGAAAAATACTTTGGCTGCTGACAAACTTCTCCCAAAGACCTCATACTTATAAGAACAAAAACATATCAGTAATTCCACAGCTTTCTGATTTTGAGTCTGCAAGGCTAGTGATGAATCATACAGGATGCCTACAGCTTTGGCGCTGGGATGATATCATACAATGGACATCCATCTGGAAAGAACCAGATAACGATTGCAAGAGATATAACCACTATGGGAACTTTGGAAGTTGCAATATCGATAGGTCGCCTCTCTGTAGGTGTTTGCCGGGATTCGCTTCGATGTCGATGTCACCGGGGGAGAACCCGAATCCCTCCTCTAAATATGGAGGGTGTTTCAGAAAAACAACATCATGCGGGCAAAACATGACGACATTCATTGAGTTGAAGAAAGTGAAAGTGATAAAGCCAGACAAGAAAGTCTACGCAGCCAACGAAACAGAGTGCCAAACAATGTGCCTCAATGGGACTGGGTGCCCCAATTGCACTGCTTATTCATATGATAAATCAGCTGTCTATAGTAAGACGTTCGCACCGTGTTCTATTTGGACTTCCGAGTTACCTACCATTCAAGAAGAGATTGATTCCGGCATTAATATTTCTGTCCTGGTAAATAAACAAGATATAGGGCCTCTTGAATTTTGTGATTTAGGAGAGAGTTATAGAGTGACTAATATCGATCCAGACAAGAGATCCTTCTCTATTCAAATCAATGTTCCGAAGGATTGTGCTGCAAGCAATCTCTGGCGTCGGCTTCGTCTCCCATTTAGTGTGACTCAACAGTGCGATGAAGTCGAAGGACAGACACTACAGACACTACAGACACTGAAGATTAATTGGTCTCCCCCAGATGAACCTCCCTGTAGTAACTCCACAGACTGCAAGGGCTGGTCTTATTCAACTTGCAAGGCAGCCAGAAATGGAAATGGAAGATGCCTCTGCAATAAAAATTATCAATGGAATGGCGGCAGTTTAAGCTGTACTCCAGAAGCTAACACGTTTCCTTTGTCAATAGAGCTTCCAAGAGGAAACAACTCTGAAGTTTTGATATTAGCGGTGACATTTTCAAGCTTGATTTTCTTGGCCTGCATTGTAACTTCTGCTTACATTTGGAGAAGAAAAGTAACCTTGAAGCAAGAAAATGGACAAGATCAAAGAACGAGAGAGAGCCTACATGACAGTGAGAGATATATAAAAGATCTCATGGACGCGGAGAGGTTAGAGGAAAATGACAGTGAAGTGATAGAGGTACCTTATTTGGATTTTAATAGCATCCTATTAGCCACAGATAACTTCTCAGATGCGAACAAGCTTGGACGTGGGGGTTATGGACCTGTCTACAAGGGCAAGCTTCCAGGAGGTCAAGATATTGCAGTAAAGAGGCTTTCAAGTGTATCTTCTCAAGGATTGAAGGAATTCAAGAATGAAGTTGTTTTGATATCCAAACTACAACATAGAAATCTTGTTAGACTTCGAGGCTATTGCATTACAGGAGAAGAAAAAATATTACTTTATGAATATATGAAAAACAAGAGCTTAGACACATTCTTATTTGATCGTACACAAAGAGTGATTTTAGATTGGCCAATGCGCTTTGATATAATTCTAGGAGTTGCTAGAGGGATGTTATATCTTCATCAAGACTCTAGATTGAGAGTGATTCATAGGGATTTGAAAACTAGTAATATTCTCTTGGATGAGGAGATGCAGCCAAAAATTTCAGATTTTGGACTCGCAAAAATATTTGGAGGCAAGGAGATTGAAGCTAACACTGAGAGAATAGTTGGAACTTATGGATACATGTCTCCAGAGTATGCATTGGATGGATTTTTCTCAATCAAATCAGATGCTTTTAGTTTTGGTGTTGTGATGCTTGAAATTATCAGTGGAAAAAAGAACACGGGATTCTTTCAATCCAAACAAGCTTCCAGCCTTCTGGGTTATGCATGGAGGCTATGGACAGAGAATAACTTGTTGGATTTAATGGATCGATCTTTGATTGAAAGCTGCAACGTAAATCAGTTCATTAAGTGTGCTCAAGTTAGTCTATTGTGCGTACAAGATGAACCAGGAGACAGGCCTACCATGTCGCAGGTAGTGATAATGCTTGAAAGTGAGACTGCAAGCCTCCCAACTCCAAAGCAACCAACCTTTTTTATGACAAGAGACAGAGGCCTCTCTATCTCTGGTTCTTCTTCTAGCAAGCCTGAAGGAATTCTTCCAACTGATAGTTCCTATCAAGAAGGACGGTAG 2949 0.4151 MRVALLPSSPEKSITMRIMIALVLFYAFLPCLRLSCLASDTLKMGEKLLNTRDGSANLVTTGQKLRFELGFFPPSGRPKRYLGIWYHKIEPLTVVWVANRDNPIPSKTASFQISQDGNLTVNDTDGTVYWSSTPAQVSSLTNLTVKLMDSGNLILGDDLLQSTYWQSFQHPTDTFLPGMKMDKNLVLNSWRGPDDPSSGNYTFTGGKTGASNYTIYINQNQVYWAGEDFSSEGKILWLLTNFSQRPHTYKNKNISVIPQLSDFESARLVMNHTGCLQLWRWDDIIQWTSIWKEPDNDCKRYNHYGNFGSCNIDRSPLCRCLPGFASMSMSPGENPNPSSKYGGCFRKTTSCGQNMTTFIELKKVKVIKPDKKVYAANETECQTMCLNGTGCPNCTAYSYDKSAVYSKTFAPCSIWTSELPTIQEEIDSGINISVLVNKQDIGPLEFCDLGESYRVTNIDPDKRSFSIQINVPKDCAASNLWRRLRLPFSVTQQCDEVEGQTLQTLQTLKINWSPPDEPPCSNSTDCKGWSYSTCKAARNGNGRCLCNKNYQWNGGSLSCTPEANTFPLSIELPRGNNSEVLILAVTFSSLIFLACIVTSAYIWRRKVTLKQENGQDQRTRESLHDSERYIKDLMDAERLEENDSEVIEVPYLDFNSILLATDNFSDANKLGRGGYGPVYKGKLPGGQDIAVKRLSSVSSQGLKEFKNEVVLISKLQHRNLVRLRGYCITGEEKILLYEYMKNKSLDTFLFDRTQRVILDWPMRFDIILGVARGMLYLHQDSRLRVIHRDLKTSNILLDEEMQPKISDFGLAKIFGGKEIEANTERIVGTYGYMSPEYALDGFFSIKSDAFSFGVVMLEIISGKKNTGFFQSKQASSLLGYAWRLWTENNLLDLMDRSLIESCNVNQFIKCAQVSLLCVQDEPGDRPTMSQVVIMLESETASLPTPKQPTFFMTRDRGLSISGSSSSKPEGILPTDSSYQEGR 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0616 982 CDD B_lectin 67 171 IPR001480 -
Acco08g0616 982 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 195 IPR036426 -
Acco08g0616 982 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 740 943 - -
Acco08g0616 982 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 139 961 - -
Acco08g0616 982 Pfam PAN-like domain 351 419 IPR003609 -
Acco08g0616 982 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 629 739 - -
Acco08g0616 982 ProSiteProfiles PAN/Apple domain profile. 351 439 IPR003609 -
Acco08g0616 982 Gene3D Transferase(Phosphotransferase) domain 1 740 947 - -
Acco08g0616 982 ProSiteProfiles Bulb-type lectin domain profile. 39 168 IPR001480 -
Acco08g0616 982 MobiDBLite consensus disorder prediction 956 982 - -
Acco08g0616 982 CDD STKc_IRAK 670 936 - -
Acco08g0616 982 ProSiteProfiles Protein kinase domain profile. 664 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0616 982 FunFam Receptor-like serine/threonine-protein kinase SD1-8 34 168 - -
Acco08g0616 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Acco08g0616 982 SUPERFAMILY Protein kinase-like (PK-like) 646 959 IPR011009 -
Acco08g0616 982 Pfam D-mannose binding lectin 93 186 IPR001480 -
Acco08g0616 982 Pfam Protein tyrosine and serine/threonine kinase 668 933 IPR001245 GO:0004672|GO:0006468
Acco08g0616 982 Gene3D Phosphorylase Kinase; domain 1 627 739 - -
Acco08g0616 982 Gene3D - 37 170 IPR036426 -
Acco08g0616 982 SMART serkin_6 664 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0616 982 Pfam S-locus glycoprotein domain 224 326 IPR000858 GO:0048544
Acco08g0616 982 SMART blect_4 49 171 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0616 Acco-ChrAcco08 5319453 5324003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0616 639 952 Receptor kinase-like Gene Family AT4G23150 55.732 1.13e-121 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0616 PK_Tyr_Ser-Thr 1e-44 CL0016