Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0613 ATGCTCAACCGGTCTGCAAATCACATGCTCCCAGTATGCTTTTTTCATGCATTGTTTTTCTCTTTTATTATGCATTGTTCTGCTAGGGATGCCATAAGCATCAACAATTTCTTAAGTGAAAGGGAAGGGGATACTCTTATTTCCTCTGGAGAAACATTTGAACTAGGATTCTTCACCCCTAATGGAAGCTCTGGTAGTGGAGGATATGTGGGAATATGGTACTACAAGTCAAATCCACCTACAGTTGTGTGGGTTGCAAACCGAGACAATCCACTTTCTGATGCTGGAGGTGTTCTAGCCATATCTGAGGATGGTAATCTCAGAGTTTTGGATGGAAGTGGGAGATCTCACTGGAGTACAAATCTTGAAACGTCATCTTCAGCGCACAGGACAGTTAAGCTAATGGATAGTGGAAATCTTATTTTAAGCGAAGAAGAACGAGGAAGTCACTTGGTGAAGATTGTCTGGCAGAGTTTTGAAAATCCAACAGATACATTTCTCCCAGGCATGAAAATGGATGAGAATCTGGTGCTAACTTCTTGGAGAAGTTATGATGATCCGGCGCCTGGGAACTTCTCATTTCGGCAAGATCAAGGAGAGAACCAATATATCATATGGAAAAGATCCATCCAATATTGGAAAAGCAGTGTGACAGGTACATTTTTAGGGTCAGGTGAAATATCTCCTGTGATATCTTACTTATTGTCTAACTTCACCCAGAGAATATCTCCAAATAACTCTGTACCCTTTCTTACTTCATCTCTGTATGGCGACTCAAGACTGGTTATGACATATTCTGGTCAACTTCAGTATTTGAAGATGGATTCAAAGAAAGTTTGGTACTTGGTTTGGGCAGAGCCACGAGATAGGTGCAGTGTGTATAATGCTTGTGGTAACTTTGGCAGCTGCAATAGTTATTATGATTCCATGTGCAAGTGTTTACCTGGGTTCACGCCTAATGCGCCAGAAAGTTGGGACTCCGGTGACTTCTCTGGTGGATGCAGGAGGAAAACAAATGTGTGCAGAGAGAATGCTGAGAGTGACACGTTTTTTAGTTTGAAAATGATGAAAGTAGGGAGCCCGGATTCTCAATTTAATGCTAAGAATGAAATGGAATGCAAGTTAGAATGCCTTAACAATTGCCAATGCTATGCATATTCATATGAAGATCCTAAAATCACAGGGAGTGTTGCTAGTGGTGATGCAGTTTGCTGGATTTGGACTGAAGACTTGAACAATCTCCAAGAGGAGTATGAGAATGGATATGATCTCAATGTACGTGTGGCATATTTTGATATAGCGTCCAATTGCAGGACCTGTAGGACTTGTGGTACAAACTTCATTCCATATCCACTTAGCACAGGTCCATTTTGTGGTGATCCCCTGTACTTAAGTTTTCACTGTAATGTCACAACAGGAGTACTTAACTTTAAAACTCCTGGGGGAACTTATCAAGTTATAAGCATAAACCCTGAAACTCAAAAATTCACGATCCATAGCAGAGACATAGTTGATTGTGAAGGTCAAAATTTGAGGGACAAGCTTCTGCGTTTAAACCAGCCATCTCCATTTCATCTAACTGGCAGATGCAATGCTGATCCGAGCACCCTTAATACTATTGGGCCTGCAAAAGTTGGTGGGGAAATTGAGATGAGCTGGGATCCACCATTGGAGCCACTTTGTCGATATTTTTCAGACTGTAAGGATTGGCCAGATTCAATTTGCAATGCTTCCAGAGATGGGCAAAAGAGATGTCTTTGCAAAAAAAACTTTCTTTGGGATGGCTTGAGTTTAAATTGTACCATCGAAGGCAGCCGCGGCAATCAAACAGGCAGGCGTTTCTCTGCTCCTTTGATTATTGCAGTCACTCTCACTATTGTGATTGTTTTGATTCTGCTATCAAGTACCTTTACCTTTGTTTACTTTTGGAGGAGAAGGCCGATCAAGACAAAAGAGATCAGGGAATGTGTTAAGAAAAAATCAGCGAGGAGCTTGTATGAAAGTGAGAGTTATGTCAAGGATTTGATTGAATCGGGCAGGTTCCGAGAAGATGATGGACATGCCATAGATATCCCACATTTTCATTTGGAAAGCATACTTGATGCTACCAATAATTTTTCAAATGCAAACAAGCTTGGACAAGGAGGATTTGGTCCTGTCTACAAGGGGAAGTTTCCAGGAGAACAAGAGATAGCAGTAAAGAGACTCTCTAGTTGTTCTGGACAAGGTTTAGAAGAGTTCAAAAATGAAGTTGTATTGATTGCCAAGCTTCAGCATCGAAACTTGGTTAGGCTTCTTGGTTATTGTGTTGAAGGAGATGAAAAGATGTTAGTGTATGAATACATGCCGAATAGGAGTCTAGATTCTTTCATATTTGATAGGAAGTCATGTGTTATGTTAGATTGGGGCAAGCGTTTCAAGATTATTTTGGGGATTGCGCGAGGGCTTCTTTACCTACACCAAGACTCAAGGTTAAGAATCATCCATAGAGACTTGAAAACAAGCAATATTCTACTAGATGAAGAGATGAACCCTAAAATCTCAGATTTTGGCTTAGCTAGGATCTTTGGAGGAAAAGAAACAGCAGCAAACACAAGTAGAGTGGTTGGAACTTATGGCTATATGTCTCCAGAATATGCACTAGATGGATTTTTTTCAGTCAAGTCTGATGTGTTTAGCTTTGGTGTGGTGGTACTTGAGATTCTTAGTGGAAAAAGGAACACAGGATTTTACCAGGCAGATCATGAATTGAGTCTCTTAGGCTACGCGTGGCATTTATGGAAAGTAGAGAGAGCACTGGATTATATGGATCAGACACTATCTCAGACATGCAAGAAAGATGAATATTTGAAGTGCGTAAACGTTGGACTGTTGTGCGTACAAGAAGATCCAAATGACCGTCCGACCATGTCCAATGTAGTTTTCATGCTTGGAAGTGATTCTAGTACTCTTCCAACTCCAAAGCAGCCAGCCTTTGTTGCTAGAAGATGCCCTTCTAGCAAAGCTTCTACTACCAGTAAACTGGAATCTTGTTCCCATAATGAACTGACTGTCACTTTAGAAAACGGTAGGTAG 3075 0.4091 MLNRSANHMLPVCFFHALFFSFIMHCSARDAISINNFLSEREGDTLISSGETFELGFFTPNGSSGSGGYVGIWYYKSNPPTVVWVANRDNPLSDAGGVLAISEDGNLRVLDGSGRSHWSTNLETSSSAHRTVKLMDSGNLILSEEERGSHLVKIVWQSFENPTDTFLPGMKMDENLVLTSWRSYDDPAPGNFSFRQDQGENQYIIWKRSIQYWKSSVTGTFLGSGEISPVISYLLSNFTQRISPNNSVPFLTSSLYGDSRLVMTYSGQLQYLKMDSKKVWYLVWAEPRDRCSVYNACGNFGSCNSYYDSMCKCLPGFTPNAPESWDSGDFSGGCRRKTNVCRENAESDTFFSLKMMKVGSPDSQFNAKNEMECKLECLNNCQCYAYSYEDPKITGSVASGDAVCWIWTEDLNNLQEEYENGYDLNVRVAYFDIASNCRTCRTCGTNFIPYPLSTGPFCGDPLYLSFHCNVTTGVLNFKTPGGTYQVISINPETQKFTIHSRDIVDCEGQNLRDKLLRLNQPSPFHLTGRCNADPSTLNTIGPAKVGGEIEMSWDPPLEPLCRYFSDCKDWPDSICNASRDGQKRCLCKKNFLWDGLSLNCTIEGSRGNQTGRRFSAPLIIAVTLTIVIVLILLSSTFTFVYFWRRRPIKTKEIRECVKKKSARSLYESESYVKDLIESGRFREDDGHAIDIPHFHLESILDATNNFSNANKLGQGGFGPVYKGKFPGEQEIAVKRLSSCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYCVEGDEKMLVYEYMPNRSLDSFIFDRKSCVMLDWGKRFKIILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETAANTSRVVGTYGYMSPEYALDGFFSVKSDVFSFGVVVLEILSGKRNTGFYQADHELSLLGYAWHLWKVERALDYMDQTLSQTCKKDEYLKCVNVGLLCVQEDPNDRPTMSNVVFMLGSDSSTLPTPKQPAFVARRCPSSKASTTSKLESCSHNELTVTLENGR 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0613 1024 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 159 - -
Acco08g0613 1024 ProSiteProfiles Bulb-type lectin domain profile. 31 155 IPR001480 -
Acco08g0613 1024 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 671 781 - -
Acco08g0613 1024 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 187 IPR036426 -
Acco08g0613 1024 Pfam S-locus glycoprotein domain 220 320 IPR000858 GO:0048544
Acco08g0613 1024 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 967 - -
Acco08g0613 1024 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 782 985 - -
Acco08g0613 1024 Pfam PAN-like domain 344 413 IPR003609 -
Acco08g0613 1024 SMART blect_4 37 162 IPR001480 -
Acco08g0613 1024 ProSiteProfiles PAN/Apple domain profile. 341 429 IPR003609 -
Acco08g0613 1024 Gene3D Transferase(Phosphotransferase) domain 1 782 986 - -
Acco08g0613 1024 CDD B_lectin 35 162 IPR001480 -
Acco08g0613 1024 CDD PAN_AP_plant 341 429 - -
Acco08g0613 1024 ProSiteProfiles Protein kinase domain profile. 706 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0613 1024 SMART serkin_6 706 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0613 1024 Pfam Protein tyrosine and serine/threonine kinase 709 975 IPR001245 GO:0004672|GO:0006468
Acco08g0613 1024 SUPERFAMILY Protein kinase-like (PK-like) 690 1000 IPR011009 -
Acco08g0613 1024 Pfam D-mannose binding lectin 81 177 IPR001480 -
Acco08g0613 1024 CDD STKc_IRAK 712 977 - -
Acco08g0613 1024 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Acco08g0613 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Acco08g0613 1024 SMART ntp_6 345 428 IPR003609 -
Acco08g0613 1024 Pfam Domain of unknown function (DUF3403) 979 1024 IPR021820 GO:0004674
Acco08g0613 1024 Gene3D Phosphorylase Kinase; domain 1 671 781 - -
Acco08g0613 1024 Gene3D - 25 160 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0613 Acco-ChrAcco08 5292531 5297501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0613 618 992 Receptor kinase-like Gene Family AT4G23230 52.533 1.59e-126 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g0613 PK_Tyr_Ser-Thr 1e-47 CL0016