Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0602 ATGGAAGATTGCTGTGATCTTGAAGTGGATATAAATGGACAAGAGACCTTCCTGGTGAACAAAAATCTTGTTGCTCGCTATTCAGGCAAATTCATCAAATTGTTTGGGAAAAATAGAAATCCCAATAGGAAGCTTAAAGTAATATTCCATGACTTTCCAGGAGGGGCATCAGGTTTTGAGCTTGTATTGAGATTTTGTTACAACAATGGAAAATATGACATAACTCCTTACAATCTGTTCCTGGCTCACTCTGCTGCAAAATTCATGGAAATGAAAGAGTCCATTTTTGCTGGAAAGAGTCCTAATTTGTTGGAGCAAACAGAAAAATTACTCCAAGAGATTGGCTATTGGACATGGTCTGACCTTTTAACAGCCTTGAAACAGTGCCAAGATTTCACGCTAGTCGCAGGTTGTTCTACCATGATGCTTGAAAAATGCTTGGAATCCATAGTTGGGAGGCTGGTTTTGGCCAGCGAAGCAAGCCCATGTCCATCTTCTTGTTCCTCTGACATTTCTGGGGATCGATGTTCCAGCGAGTCCAAAAGCACAGAGAGTACAAAGACTCTATTTTCTCGTTCCACATGGTGGTTTGAAGACCTCCTATTTCTCAGTCCCTTGCTGGTTCAAATGCTGGTAAAGTCTATGCTTTGGCGAAAACTGGACCATGTTATAATCAGTAGGTTTCTGATGTACTACCAGAAGGCAAAGTTTTCTTCTGCCACAACCGATGAGAAGAGGAAGATCATTGAAATGGTCATAGACATGCATTACAGTATGGACCCTAGTGTTCTTCCTTGCAAGACTTTATTTGGGATTGTCCGAATCACTCTCAACTTGAACATAAGCAAATTTAGCAAGAACAAGTTGGAGAATATGATTGGCGCACAGTTGGATCAAGCAACATTAGATAATTTGCTTGTTCCATCTCCTTATGGAATAGACTACTTATACGACGTGAATCTTGTCCTGAGATTCTTGAAAGCATTCCTGCGACAAGGAAACTGTCTGGTCGCTCATTCTCGGATGAAGAAAGTTGCCAGATTTATTGATTTGTATATAGCTGAAATAGCTCCTGATCCTTATTTAAAACCTTCCAAGTTCTTGGCTCTTGCCTTAGCTCTACCAGATTCTGCAAGAGACTCCTACGATGAACTGTATCATGCAATGGACATGTATCTTGAGGTGCATGGGGATTTGTCAGAGGAAGAAAGGCTGAAGATCTGTGGTGCTTTGAATTATGAGAAGCTTTCAGCTGAGGCATGCTTGAATCTGTCTCAGAACAAAAACTTCCCATCAAAATCTGCAGTTAAGGCTCTCATTGTTCAACAATCCAAGCTCAAAAACTTGATTCTTGGCACTCCCAATAATAATGCTGCAGCTTCAATCACCATTTCGCCGCGTAGTTCCAGCGATGCCGGAAGAAGAGGAACGAGACACAGAATCAAAGAACAGGTCATGCTGTATACTACAGAGTTTAATGTTTCAGCCCAAGACAAGAGATTCGCAGCAAACTTGCAGGGAATGCAATGGAGGGTCACAGAATTGGAGAGCATGTGTAGGAAATTGCAAGCCCAAATAGCAAAGATAATGAAATCAAGAGTTTCAGGACATAGTTACTCAAGATCTTTGCCCAAACTCTGTTCATGA 1647 0.4129 MEDCCDLEVDINGQETFLVNKNLVARYSGKFIKLFGKNRNPNRKLKVIFHDFPGGASGFELVLRFCYNNGKYDITPYNLFLAHSAAKFMEMKESIFAGKSPNLLEQTEKLLQEIGYWTWSDLLTALKQCQDFTLVAGCSTMMLEKCLESIVGRLVLASEASPCPSSCSSDISGDRCSSESKSTESTKTLFSRSTWWFEDLLFLSPLLVQMLVKSMLWRKLDHVIISRFLMYYQKAKFSSATTDEKRKIIEMVIDMHYSMDPSVLPCKTLFGIVRITLNLNISKFSKNKLENMIGAQLDQATLDNLLVPSPYGIDYLYDVNLVLRFLKAFLRQGNCLVAHSRMKKVARFIDLYIAEIAPDPYLKPSKFLALALALPDSARDSYDELYHAMDMYLEVHGDLSEEERLKICGALNYEKLSAEACLNLSQNKNFPSKSAVKALIVQQSKLKNLILGTPNNNAAASITISPRSSSDAGRRGTRHRIKEQVMLYTTEFNVSAQDKRFAANLQGMQWRVTELESMCRKLQAQIAKIMKSRVSGHSYSRSLPKLCS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0602 548 Pfam NPH3 family 194 421 IPR027356 -
Acco08g0602 548 SUPERFAMILY POZ domain 2 93 IPR011333 -
Acco08g0602 548 ProSiteProfiles BTB domain profile. 5 69 IPR000210 GO:0005515
Acco08g0602 548 PANTHER OS12G0117600 PROTEIN 6 524 IPR043454 -
Acco08g0602 548 ProSiteProfiles NPH3 domain profile. 194 445 IPR027356 -
Acco08g0602 548 Coils Coil 505 532 - -
Acco08g0602 548 Gene3D Potassium Channel Kv1.1; Chain A 1 114 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0602 Acco-ChrAcco08 5099766 5102371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0602 17 546 EF-hand Containing Proteins AT3G44820 27.713 2.95e-56 198