Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0601 ATGAAAACTGAGTTAAAAGGAAGTACTACTTCCATTTCCCTTCAACACCCAACTCTCTTCGATCCACCCGACAATAATAATCAAGATCTCTCAGGAGAACTCAAAGGGTGTTTGGGAAGTCTCGATGGAGCTTGTATAGAGAAGCTCTTACTTCATTGCGCTAGTGCTTTAGAAAGTAACGATGTAACTTTAGCTCAACAAGTCATGTGGGTACTCAATAATGTTGCTTCTCCAATTGGAGACACCAACCAAAGGCTCACCTCGTGGTTCCTCAGAGCCTTAATCTCTAGGGCTTCACGAGTATGTCCTATGAACTTCAACGGACGAAGCAGTACCATCCAGAGAAGGCTAATGTCCGTGACGGAGCTTGCAGGGTACGTTGATCTTGTTCCTTGGCATAGGTTTGGCTTTTGTGCTTCTAATAGTGCTATTTTTAAAGCAATTCAAGGGTTTCAAAGAGTGCACATACTAGATTTTAGTATCACCCATTGTATGCAATGGCCCACTCTTATAGATGCTTTGGCCAAAATCCCAGAAGGCCCTCCTGAGGTTAAAATCACAGTGCCTTCTTTTCGGCCACGTGTCCCTCCTTTGGTCAATATTTCAACAGAAGAAGTTGGGCTGCGTTTGGGGAATTTTGCTAAATTCAGGGATGTCCCTTTTGAATTCAATGTGATTGGAAGGAACAGTACATCTTCTGAATTAAGCAATATTAATGATTCATCATCCAGCTTTTTTCCCGTTGAGTCACTGTTAAGTCACTTGAATCCCACTATGTTAAATCTTAGGGAAGATGAAGCGTTGGTGATAAATTGTCAAAACTGGCTACGTTACTTGTCTGATGAAAGAAAGGGCACTTTCCAAGAAGCATCTCCTAGGGACACGTTCATAAATCTAATTAAAAGTCTTAACCCTAGAATAGTACTTTTAGTTGACGAGGATTGTGATCTTAGTGTACCAAGTCTCACGTCAAGAATCATCACTTGTTTCAACTATTTGTGGATACCCTTTGATGCTTTGGAGACTTTTTTGCCTAAAGATAGCAACCAGAGGGTCGAGTATGAATCTGAAATAGGCCAGAAAATTGAGAACATCATAAGCTTCGAGGGGGTTCAGAGAATAGAGAGATTAGAGAGCGGCGCGAAAATGTCGCAGAGGATGAGAAATGGAGGCTTCTTCAACGTTCCATTCTGTGAAGGAACTGTGAGAGAAGTTAAGGCTTTGCTTGATGAGCATGCAAGTGGATGGGGAATGAAGATAGAAGAAGATAATATGTTAGTTCTCACATGGAAAGGCCATAACTCTGTCTTTGCCACAGCTTGGGTCCCACATGAGTTAAACGATCATATGGGTGTGGGCTGA 1362 0.42 MKTELKGSTTSISLQHPTLFDPPDNNNQDLSGELKGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPIGDTNQRLTSWFLRALISRASRVCPMNFNGRSSTIQRRLMSVTELAGYVDLVPWHRFGFCASNSAIFKAIQGFQRVHILDFSITHCMQWPTLIDALAKIPEGPPEVKITVPSFRPRVPPLVNISTEEVGLRLGNFAKFRDVPFEFNVIGRNSTSSELSNINDSSSSFFPVESLLSHLNPTMLNLREDEALVINCQNWLRYLSDERKGTFQEASPRDTFINLIKSLNPRIVLLVDEDCDLSVPSLTSRIITCFNYLWIPFDALETFLPKDSNQRVEYESEIGQKIENIISFEGVQRIERLESGAKMSQRMRNGGFFNVPFCEGTVREVKALLDEHASGWGMKIEEDNMLVLTWKGHNSVFATAWVPHELNDHMGVG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0601 453 ProSiteProfiles GRAS family profile. 37 442 IPR005202 -
Acco08g0601 453 MobiDBLite consensus disorder prediction 1 26 - -
Acco08g0601 453 Pfam GRAS domain family 47 441 IPR005202 -
Acco08g0601 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 431 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0601 Acco-ChrAcco08 5095583 5096944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0601 10 443 GRAS Transcription Factor Family AT3G49950 46.501 1.41e-124 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco08g0601 GRAS 1.6e-88 CL0063