Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0598 ATGTTTCAAAATACTCCTTCTTCTCGGATGGGAGAAGAGGAACTAGAGGGTGTTTTGTTCGGAAAATATGAAATCCGCAGGTTACTTGGCGTTGGAGCTTCTGCTGAGGTATACGAAGTTTATAATTTTCTTACGAAGAAGCGTCTGGCCATTAAAGTCGTGAGCAAGAGCGGCATGACGACGCAGTTTCAGACGGAAATTTCTGCCATGCATCGGCTGAAACATCAACACATCGTGGAACTCTACGAGAATTTGAACATCAAGATTTCGGACTTCGGGTCGAGCGCCACAAGGAGCAATATCCGATGCGACGGCATGCTTCATGCTGTCTGTGGGACTCCTGCTTACATGGCCCCCGAGATGCTCAACGATAAAGGGTACGACGGACATAAAGTCGACGTGTGGCACTGCGGCGTCGTTTTGTACGTGCTCAAATTCGGGTCTATGTCGTTCACCGGCCCCGACCTCAAGACGCCGGATAGGAGAATTTCCCCAGGCGAGGTTTGCTTCCCCCGTTGTGGTGTATCCGAGCTTTTGAGACATTTCATTAAACGGTTGCTAGACCCAAACTCGGAAACGAGGATTACCATTAATGAGATTCTGAAAGACGATTAG 615 0.4862 MFQNTPSSRMGEEELEGVLFGKYEIRRLLGVGASAEVYEVYNFLTKKRLAIKVVSKSGMTTQFQTEISAMHRLKHQHIVELYENLNIKISDFGSSATRSNIRCDGMLHAVCGTPAYMAPEMLNDKGYDGHKVDVWHCGVVLYVLKFGSMSFTGPDLKTPDRRISPGEVCFPRCGVSELLRHFIKRLLDPNSETRITINEILKDD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0598 204 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0598 204 Pfam Protein kinase domain 23 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0598 204 Pfam Protein kinase domain 84 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0598 204 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Acco08g0598 204 Gene3D Transferase(Phosphotransferase) domain 1 87 204 - -
Acco08g0598 204 Gene3D Phosphorylase Kinase; domain 1 9 86 - -
Acco08g0598 204 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 83 - -
Acco08g0598 204 SUPERFAMILY Protein kinase-like (PK-like) 17 202 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0598 Acco-ChrAcco08 5063551 5064369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0598 18 92 CBL-interacting serine-threonine protein kinases AT2G30360 38.272 1.66e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco08g0598 Pkinase 2.8e-19 CL0016