Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0588 ATGTTAATTCAAACTAGCACAATTGCCTCTATAAATAGACCATCAACTAAGCTAGCATTCCAACATAAATTCGAGAATTACTCTATTGTCGTGCAGTGGATACCAAACAACAACAGCAAAACCATGGCATCCCAAAACGAAGGGCATGAAGCAGCAACAAGAAGAATGCTTGAAGCTCAAACCCATGTATGGAACACCGGCTTCAGCTTCATTAACTCAATGGCTTTGAGGTCAGCAATAGAGTTAAACATACCAGACATCATTCACAAGCATGGCAAGCCCATGCCTCTTCCTCTTCTCGCCTCTTCCCTTCAAATCCAACCCTCCAAAGCCCCTCACCTCCGTCGCTTGATGCGTTTCCTTACTCATACCGGCTTCTTCTCTCTCCAGAAGCTTCCAGAAACTTCTGACTACCCTGAGGGCTACGTCCTCACTGATGCATCGACCATTCTTCTCAAGGACCATCCCTTCAGTCTCGCCGCTTTTCCACTTTTCACGCTTGACCCAATCTCACTGACACCGTGGGAACATTTGCCCGCTTGGTTTCAGAACAATGATCCGACGCTGTTTGAAACGGCGTATGGAAAACCTATCTATGACTATGCCGGGAATGTGCCTCGGCCTTTCAATAACTTCACAGACTTAATGGCTCGCGATTCAAAACTGGTGGTAAAAGTGTTGGTTGAGCAGTGTACGGATGTGTTTAAGGGATGTGGCTCGCTTGTTGATGTTGGGGGTAGCACTGGCACCATGGCCAAGGCCTTAGCTGAAGCTTTTCCGGAAATGGAGTGTATTGTGTTCGATTTGCCTTACGTTGTTGATGGCTCGAAGGATTGTGGAAACCTCAAGTTCGTACAAGGAGATATGTTTCAAACTATTCCTCCTGCTGCTGATATTATCACGTTGAAGTGGACTCTATGTGACTGGGGCGACGAGAAATGTCTGAAATTACTGAAGAACTGCAAGGAGGCAGTAACAAGCAAAGGCAAGCGAGGGAAGTTGGTTATAATGGACGTAGTGGTTGCGTATGACAAGGCAGATTATGATGATAAATCGGTTGAAACACAGTTGCAATTTGATCTGTCAATAGTGACACTGTTCGCAGGAAAAGAGAGAAATGAGCAAGAGTGGGCCCACTTGTTTTCCTCTGCAGGTTTCACTACATATAAGATAACTCCAGCTCTAGGTATAAGGTCTGTCATTGAGGTTTTCCCATAA 1218 0.4548 MLIQTSTIASINRPSTKLAFQHKFENYSIVVQWIPNNNSKTMASQNEGHEAATRRMLEAQTHVWNTGFSFINSMALRSAIELNIPDIIHKHGKPMPLPLLASSLQIQPSKAPHLRRLMRFLTHTGFFSLQKLPETSDYPEGYVLTDASTILLKDHPFSLAAFPLFTLDPISLTPWEHLPAWFQNNDPTLFETAYGKPIYDYAGNVPRPFNNFTDLMARDSKLVVKVLVEQCTDVFKGCGSLVDVGGSTGTMAKALAEAFPEMECIVFDLPYVVDGSKDCGNLKFVQGDMFQTIPPAADIITLKWTLCDWGDEKCLKLLKNCKEAVTSKGKRGKLVIMDVVVAYDKADYDDKSVETQLQFDLSIVTLFAGKERNEQEWAHLFSSAGFTTYKITPALGIRSVIEVFP 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0588 405 Gene3D - 44 151 IPR036388 -
Acco08g0588 405 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 64 405 IPR016461 GO:0008168
Acco08g0588 405 PANTHER O-METHYLTRANSFERASE 55 389 IPR016461 GO:0008168
Acco08g0588 405 Pfam O-methyltransferase domain 175 386 IPR001077 GO:0008171
Acco08g0588 405 Gene3D Vaccinia Virus protein VP39 152 405 IPR029063 -
Acco08g0588 405 SUPERFAMILY "Winged helix" DNA-binding domain 54 156 IPR036390 -
Acco08g0588 405 FunFam Coniferyl alcohol 9-O-methyltransferase 46 151 - -
Acco08g0588 405 PIRSF O-mtase 40 405 IPR016461 GO:0008168
Acco08g0588 405 Pfam Dimerisation domain 74 122 IPR012967 GO:0046983
Acco08g0588 405 FunFam O-methyltransferase ZRP4 153 405 - -
Acco08g0588 405 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 156 403 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0588 Acco-ChrAcco08 4851255 4853045 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0588 74 404 Monolignol Biosynthesis Gene Families AT5G54160 32.448 3.11e-43 153