Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0580 ATGGAACCTCTATGTGAACTTTGTGGGGTGGGAAGAGCAATGGTGTATTGCAAGCCAGATTCTGCTCGTCTCTGTTTGAATTGCGATGTTCATGTACACTCTGCGAATACTCTGGCATGTCGTCATGCTCGTTCATTCCTATGCAATAAGTGCAATTCTCAGCCTGCAATTGTCCGCTGCATGATTGATGAAATCTCTGTATGTCAATCTTGTGACTTGGGCCCATATGGCTGTTCAAGTTTGGGCCATAAGTGTCAGGTATTGAGTTCTTACACCGGTTGTCCCCTTTGGGCCGAGTTCTCAAAAAAATGGCACTTTCCTTTTTCTCCTCCTTCGTCTGGTATTTTTGGTGTCACTAGTTCTCCATCATTTGACACATTTCTTCCTAGAAATGACAGCTGCTCCAGCAAGTGTTTGGAGCAACCAGATGATGACGGTGCCTCCTCTAATTTGGTGACAGGTAAGGTGAATGAAATAGAACCATGTGTCAACTATGATCCTTTGATGGGACAATCTTCTAATTCTGTGCTGCCAAACACAAATTTCTCGTCATCGTACAAAGATCAACCTTTTTCATTTCCTCTTGATTCATATCTATCAAAGGGATGTCCTAATTTAAAGGATCCTGGGTCTGTTAGTGGTGATGATCTCTGTGGAGGTCTCAACATACAAAATATTTCATTATGTTCTGAAGGTGATGATGAAATACTTGATTACACTAAAGAAGCCACCAGATACCATATTGGGGATGGAGAAATTGACTATTCATTAATGGAAAAGAGCATATCAGTGCCAAAACCCGACGGTTTTATTGAGAATGCCTTAGAGGCATCTTCATTATCAGTTCAACAGGATCGTGTAGCCTTTCAATCATCCAGTCCTAGCGAGTCAGTTAACTTGGGTCACAGCATCAACAGTAATGCAAATCCTATACCCATGAATCTGAGCTGCGACCAAAATGTCAATCCAGGATATCCTCATGGTCAAGCGTATCCAAGCATATCAGTCTCATTATCAAACATTAATGGTGAAATTAGTAAAACTATCCCTGATCATCAAGATTATGGATTACCACCAGCATTCCTGGCAGGTGTTAGTCAACCAAATTTTGGGTCTCCGTGCCCACAGGCAAGGGACAACGCTATAAGGAGATACAACGAGAAAAAGAAAAAAAGGGAGTTTAATAAACAAATAAGATATGCATCTCGCAAGGCAAGAGCTGATACTAGAAGACGGGTGAAAGGTAGATTTGTGAAAGCTGGTGAAGCTTATGATTATGATCCTCAGGTCAATGAGAACAGCAAAGCAGACTGCCGGCATTCACGGCCTTTTCCCTCGTTTTGTGATTCTGATTGAGGAAATGCACTCAGAGGTTCGTACCCAGTTTTGAGACATGTGTGGCTGTGTCCTACTCAAACACCAGCAGAGTCAAGAATCAAGAGTAAAAGGAAAAGAGGGTGGTTAGCAAGCCAGTGCAGTGCACTTCCTCAATAA 1494 0.4224 MEPLCELCGVGRAMVYCKPDSARLCLNCDVHVHSANTLACRHARSFLCNKCNSQPAIVRCMIDEISVCQSCDLGPYGCSSLGHKCQVLSSYTGCPLWAEFSKKWHFPFSPPSSGIFGVTSSPSFDTFLPRNDSCSSKCLEQPDDDGASSNLVTGKVNEIEPCVNYDPLMGQSSNSVLPNTNFSSSYKDQPFSFPLDSYLSKGCPNLKDPGSVSGDDLCGGLNIQNISLCSEGDDEILDYTKEATRYHIGDGEIDYSLMEKSISVPKPDGFIENALEASSLSVQQDRVAFQSSSPSESVNLGHSINSNANPIPMNLSCDQNVNPGYPHGQAYPSISVSLSNINGEISKTIPDHQDYGLPPAFLAGVSQPNFGSPCPQARDNAIRRYNEKKKKREFNKQIRYASRKARADTRRRVKGRFVKAGEAYDYDPQVNENSKADCRHSRPFPSFCDSDXGNALRGSYPVLRHVWLCPTQTPAESRIKSKRKRGWLASQCSALPQ 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0580 497 CDD Bbox1_BBX-like 4 47 - -
Acco08g0580 497 ProSiteProfiles CCT domain profile. 378 420 IPR010402 GO:0005515
Acco08g0580 497 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 423 - -
Acco08g0580 497 SMART bboxneu5 1 47 IPR000315 GO:0008270
Acco08g0580 497 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Acco08g0580 497 Pfam CCT motif 378 420 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0580 Acco-ChrAcco08 4799914 4803400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0580 1 428 C2C2-CO-like Transcription Factor Family AT3G21880 36.490 2.12e-75 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Acco08g0580 CCT 7.1e-16 CL0281