Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0577 ATGAATGGACTGCTGTGTATCTGTATGATGCTTTTAAAGAGGATTCTGTTTTTTATTTTTATTTTTTATTTTAATCTATTGGCTTTGAAATTTGATGTAAAATTTACTTGTGAATACAAATATGATGGAGAGCGTGCCCAGATTTACAGTAGAAATGCTGAGCTGAACAATGGAAAGTTTCCGGATGTTGCTGCTGCTATTTCAAGATGGACAGGGAATTATGAGATTGACTATTCAAAATGGGAATGTGATGATTCCATGTCAGGGCCTAAAGTGTCGGGGTCTATTGGGGCCTTGCTGGAATATGGAGCTTTTCTCCTTGCTTGCTATTACAGCAGTAATGAAGAATTTCAAAGCATCTGTAAAATAGGCACGAGATTCTCAGAGGCAATGCTTGAAGAACGTTCTGCTAGTCTTTGTTCCAAAGTGATTCCCAAACCAAAGATCTCTCCTTATTATCAATATGCAGAGACAATCAATCCTGATGTATGGTTTAAAGCTTCTGAGGTGTGGGAGGTGAAAGGAGCGGACTTGACCATTGGCCCTGTTCACCGTGCTGCAGTAGGCGTAGTAGATTCAGATAAGGCCATATCTCTTCGGTTCCCTCCTCTTGTTCGTGTTCGGGATGACAAAGCTGCTGAACAAGCCTCTTCTTCTGAGATGGTTGCTGAAATGTATTCTGCTCAAAAGCTCAAACTAATCAAACCGGGAATAAAGTGTTCCCAGGAGAGGGCGCGAGAGCAGCTGGCGTTGAAGCGGGCTGAGGCAAGATCGTTACTCGGGCGACAATGA 792 0.4242 MNGLLCICMMLLKRILFFIFIFYFNLLALKFDVKFTCEYKYDGERAQIYSRNAELNNGKFPDVAAAISRWTGNYEIDYSKWECDDSMSGPKVSGSIGALLEYGAFLLACYYSSNEEFQSICKIGTRFSEAMLEERSASLCSKVIPKPKISPYYQYAETINPDVWFKASEVWEVKGADLTIGPVHRAAVGVVDSDKAISLRFPPLVRVRDDKAAEQASSSEMVAEMYSAQKLKLIKPGIKCSQERAREQLALKRAEARSLLGRQ 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0577 263 Gene3D DNA ligase/mRNA capping enzyme 24 79 - -
Acco08g0577 263 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 34 71 - -
Acco08g0577 263 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 34 70 - -
Acco08g0577 263 CDD OBF_DNA_ligase_I 102 226 - -
Acco08g0577 263 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 38 46 IPR016059 GO:0003909
Acco08g0577 263 Pfam ATP dependent DNA ligase C terminal region 102 211 IPR012309 GO:0003910|GO:0006281|GO:0006310
Acco08g0577 263 Gene3D - 93 230 IPR012340 -
Acco08g0577 263 SUPERFAMILY Nucleic acid-binding proteins 102 229 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0577 32 69 Core DNA Replication Machinery Family AT1G08130 64.583 5.38e-12 63.9