Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0572 ATGGTTGCTACCAAGACAATCTATGCAATAAATTTGTCATTTGTCTCCCTGGGTGTTATTTTCTTTTCTGTTTCTTTTGCTCCTGAAATGCTGAACGGAAGGCGAATCTGGCTCGTCGCTCTAAGGCCGACGGTCTTGCCTTGTGGTGCGATGAGGAATGATGATCGTGAATGCGACAGAGACCCGGCTCCTGAGGACTTAACTGCAAACTGTCTGGAGTATCCTGTTGTGGTGGTAGAACAGATTTGCGCTTGGGCTGCTATGAGAAGAAAAATTGATGACCCAATCACGGTGCCTTCCTCGCATCTCCTCTTTACACAAATACAAACACTGAAGCTAAAAAATTCCCATTTGAGCTTCTTTATTACAATGGCTGACATGAATCGTGCTTCTGAGGATGTTCCTGCAGATTCTGCAGGATGTTTCTTTGCAGAGCAAACCAGTCAAGCTTCCAAGGCTGAGTTTTCTGAAGATGAAGAAACCCTTATAACCAGGATGTACAATCTGGTTGGTGAGAGGTGGTCTTTGATCGCTGGAAGAATCCCAGGAAGAACAGCAGAGGAAATAGAGAAGTTCTGGACTTCAAGATTCTCAACCAGTGAATAA 606 0.4455 MVATKTIYAINLSFVSLGVIFFSVSFAPEMLNGRRIWLVALRPTVLPCGAMRNDDRECDRDPAPEDLTANCLEYPVVVVEQICAWAAMRRKIDDPITVPSSHLLFTQIQTLKLKNSHLSFFITMADMNRASEDVPADSAGCFFAEQTSQASKAEFSEDEETLITRMYNLVGERWSLIAGRIPGRTAEEIEKFWTSRFSTSE 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0572 201 Pfam Myb-like DNA-binding domain 154 194 IPR001005 -
Acco08g0572 201 Gene3D - 154 197 - -
Acco08g0572 201 FunFam MYB-like transcription factor 154 196 - -
Acco08g0572 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 152 201 IPR017930 -
Acco08g0572 201 ProSiteProfiles Myb-like domain profile. 147 197 IPR001005 -
Acco08g0572 201 SMART sant 151 199 IPR001005 -
Acco08g0572 201 CDD SANT 154 193 IPR001005 -
Acco08g0572 201 SUPERFAMILY Homeodomain-like 152 197 IPR009057 -
Acco08g0572 201 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 150 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0572 Acco-ChrAcco08 4692076 4698601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0572 152 197 MYB Transcription Factor Family AT5G35550 56.522 5.83e-13 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco08g0572 Myb_DNA-binding 1.9e-07 CL0123