Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0547 ATGCAGGGGATGATGATACACAGTGACGATGAATTTAGAGACGAGGCGATGGTGGCAGATGCAGCGGGCGAGGCGGAGCAGAACATGAAGAAAGGGCCGTGGACGGCGGCGGAGGACGCGATATTGACAGAGTACGTGAACAAGTACGGGGAGGGGAATTGGAATTCGGTGCAGAAGAACTGTGGGTTGAGGAGGTGTGGCAAAAGTTGCAGACTCAGATGGGCCAATCATCTCAGGCCTAATCTCAAGAAAGGTGCTTTCTCTGAGGAAGAAGAACACCTTATCGTCCAGCTTCACGCCAAGCTTGGCAACAAATGGGCTCGCATGGCCTCCCTGTTACCTGGGAGAACTGATAATGAAATAAAGAATTTCTGGAACACGAGAATGAAAAGACGCCAGCGAGCTGGGGTGCCTCTCTATCCTGCAGAAATTGAAGAAGAAGCCTCTGTGCATCATCTTCACCAAAACCAGCAATACCATAATGCACTGCCACCTCACCATTCTTTCTCATTTTCTTCTCTCCTATCCTCTCCCTCCAACACACCCCATAACCTCAATGACCATCTGTACAGTTCGGATGATTCTGATTCAACCTATGTTACGGGCCTCCCGTTACTACCCACCGCCGTTTCTCTAAATGGGCTTAATTATTCCGGTGGTCGTACGATGACAGAGATCTCCCCAACCCTATCGGAAACACCTCCTTCATCCTACAGTACTGGTGGTGGTAAGTTTCATGGCTTGATGGGAGGTTCTAGCATTGGTCCCGGTGGTGTTGACTACCATGAAGTTGCACTATTGTCATCATCAACTGAAGAAAACAGTGGGCTCTTGGAAGCTGTACTTATGGAGTCTCAAGCCCTTTCTCGCAGTGACAAAGGCAAGTGTAAAAGTAATGATTCTTCTGCAGGAATGAAACGCTTTATCTCCAAGAGGAAACGCATTGCAGAAGAGAAAGCCAAGGACATTAATGATGAACAATTGGAGTCAGATGGGAAGAATAACGATAATGTTGAATTCCGGAGGGATGATCTAAATTCTTCTAAACTGTCAGCAGCAGAGAAGAAGGCATCATCGGTTAGGGATAATAATGATCCAATGGAGGAGATGAGTTCGATGGACGATGACTTGTTTAGCTTGCTGAACAATTTCCCGTCAGAAGTACCGGTTCCTGAGTGGTACCGAAGAGGAGCAATACAAGCAGTGGAAGTTGAAAATCAACAAAATGATTCATTGGGCCAACCGGATCAGCAATTTGCTAGGACCCTCGAAACCCGCTGGTCCAACGTTAACGACTTGTCAAGTATATGCTAA 1314 0.4718 MQGMMIHSDDEFRDEAMVADAAGEAEQNMKKGPWTAAEDAILTEYVNKYGEGNWNSVQKNCGLRRCGKSCRLRWANHLRPNLKKGAFSEEEEHLIVQLHAKLGNKWARMASLLPGRTDNEIKNFWNTRMKRRQRAGVPLYPAEIEEEASVHHLHQNQQYHNALPPHHSFSFSSLLSSPSNTPHNLNDHLYSSDDSDSTYVTGLPLLPTAVSLNGLNYSGGRTMTEISPTLSETPPSSYSTGGGKFHGLMGGSSIGPGGVDYHEVALLSSSTEENSGLLEAVLMESQALSRSDKGKCKSNDSSAGMKRFISKRKRIAEEKAKDINDEQLESDGKNNDNVEFRRDDLNSSKLSAAEKKASSVRDNNDPMEEMSSMDDDLFSLLNNFPSEVPVPEWYRRGAIQAVEVENQQNDSLGQPDQQFARTLETRWSNVNDLSSIC 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0547 437 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
Acco08g0547 437 Gene3D - 86 167 - -
Acco08g0547 437 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Acco08g0547 437 SMART sant 30 80 IPR001005 -
Acco08g0547 437 SMART sant 83 131 IPR001005 -
Acco08g0547 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 78 IPR017930 -
Acco08g0547 437 MobiDBLite consensus disorder prediction 320 363 - -
Acco08g0547 437 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 11 191 - -
Acco08g0547 437 MobiDBLite consensus disorder prediction 320 370 - -
Acco08g0547 437 FunFam MYB-related transcription factor 30 83 - -
Acco08g0547 437 SUPERFAMILY Homeodomain-like 28 125 IPR009057 -
Acco08g0547 437 FunFam Transcription factor GAMYB 86 132 - -
Acco08g0547 437 Gene3D - 30 83 - -
Acco08g0547 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 133 IPR017930 -
Acco08g0547 437 Pfam Myb-like DNA-binding domain 34 93 - -
Acco08g0547 437 CDD SANT 33 78 IPR001005 -
Acco08g0547 437 CDD SANT 86 127 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0547 Acco-ChrAcco08 4413724 4416039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0547 274 400 MYB Transcription Factor Family AT2G32460 34.351 3.99e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco08g0547 Myb_DNA-bind_6 1.5e-14 CL0123