Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0544 ATGGGGTTGGTAAAGTCAGCCACAGGAGACGCCATTCTAACCTCAATCTGGGTTTTCGGCATCTCAACTCTTAGAATCGTCGCTTCCCAAGTCGCCTCCTTCCTTAACCTCCACCCTTCTTCACTCGCCGGCCTCTTCATCGTCACCGTCATCAACACCATTCTCGTCTTCACCATCAGTCTCATCGGCAGAATCCTCGGTGGTGCTAGCTTTAACCCCTCCACCACCGTCACCTTTTACGCTGCCGGGCTCCGACCCGACTCCTCCCTGACCTCCTTGGCTGTCCGATTTCCTGCTCAGGCAGCAGGTGGGGTTGCCGGAGTTCTTGCTATTCTTCACCTCATCCCCACCCAGTACAAATCCATGCTTAAAGGTCCTTCCTTGAAGGTTAATTTGCATACTGGGGCTATAGCAGAGAGCGCCCTAACTTTTGCTCTCAACTTGACTATTCTTGTTGTTATGTTTCAAGGTCCAAAGAACCCTTTTTTGAAATTGTATTTGATTTCTGTGGCTACTTTGTGTCTGGTTATTCCTGGTTCTGCTTACACGGGACCTTCTATGAACCCAGCTAATGCATTTGGATGGGCTTACATCAACAATAGACACAACACTTGGGAGCAGTTTTATGTTTATTGGATATGTCCTTTCATTGGAGCTACTCTAGCTGCTTCCGTTTATCGATTTCTCTTCATGTCACCAGTTAAGCAGAAGAAAGCCTGA 720 0.4806 MGLVKSATGDAILTSIWVFGISTLRIVASQVASFLNLHPSSLAGLFIVTVINTILVFTISLIGRILGGASFNPSTTVTFYAAGLRPDSSLTSLAVRFPAQAAGGVAGVLAILHLIPTQYKSMLKGPSLKVNLHTGAIAESALTFALNLTILVVMFQGPKNPFLKLYLISVATLCLVIPGSAYTGPSMNPANAFGWAYINNRHNTWEQFYVYWICPFIGATLAASVYRFLFMSPVKQKKA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0544 239 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
Acco08g0544 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0544 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0544 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0544 239 PRINTS Major intrinsic protein family signature 138 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0544 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0544 239 PANTHER AQUAPORIN SIP1-1 1 238 IPR044222 GO:0015250
Acco08g0544 239 Pfam Major intrinsic protein 16 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0544 239 SUPERFAMILY Aquaporin-like 3 233 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0544 Acco-ChrAcco08 4369297 4370016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0544 1 230 Major Intrinsic Protein MIP AT3G04090 45.652 1.22e-59 186