Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0536 ATGATCATCGTCACTAGAGCGTCATTGAGAACACTTGGTAAGACTTGCTCCTCCATTTTTAGTGCCGAGTCCTTTGCATCACTCTTCCAAGACTTCACTTCTCTCCCTTCCTCTCTTTATCTCATGGCCAGAGGGGTTGGACTTTCCATTGATTCAGATCCACCTGTTAAAGCCTTCTTTTTCTCCAATCCCATTGTTTTCCAAGACGAACACCTTCAACCCCCAATGGAATCTACTTTCCCTGTAGAAATGGATTTCTTCTCTGACAGCAACAGCAATCTCAAACTTCCCTCTGCCTCTTCCAGCGATGATTTCTCTACCCCTCCTCCTCATCATCTTGATTTCAAACTCAATACTGGTCTCAATCTCTTGACTACTAACGGCGACCAATCCCTGGTGGACGGTGCGTTTGACATGTATTCTGTTTTCAAAGACAAAAGAGCCAATATCAGTGAGAGTGAGATTGCTGTTCTTCGAGCTCAGTTAGAAAATTTGACGATAGAGAATCATAAGCTGGAAGACACGCTTGATAAGGTAACCACAGAATACAATGACCTACAAATGCAGGTACATTTAACCATGTCTCGCCATAAGGGCAGTGAGGAGGCTGATGAGGAACCTGAAAACGAAGGGCTTGGTGGGGGAAGTGGATCAGAAGAAAAGAAACAGAGTGAGAGTAACAGAGGAAGCTTAGTGCCAAGGAAATTTATAGATCTAGGATTAGCTTCCATCAATGATGGTGAGGCTAATAATAGTGATGAGCCTTCGCTCTCTTCGTCCAAAAGGAGAAGCAGTGAGAGTTCAAGATCACCATTGGAAGTGGAACGTAGGGCCAGAATTGGTTCTGATAAGAAGGAACTGATCAAAGAAAATGAAAGTCAAGAAGAAGCTGATCAGAAGACCCAAAAGTGTAGTCCTCCGAGGAACATTGATGATCAGGCAGAAGCCACTATGAGGAAGGCAAGAGTTGCAATTAGATGTCGATCAGAAACACCTATGATTAGCGATGGATGTCAGTGGAGAAAATATGGGCAGAAGATGGCCAAAGGGAATCCCTGCCCTCGAGCCTACTATCGCTGCACCATGGCCGAAGGTTGTCCCGTTAAGAAACAGGTGCAAAGGTGTGCTGAGGATAGAACAGTCTTGGTAACAACATATGAAGGAACTCATAGTCACGCATTGCCTCCAGCAGCAATGGCGGTGGCACAAACAACAGCAACAGCAGCAAGGATGTTTCTTTCTGGATCAATGTCAAGCAATGATGGTCTAATGAATGGAAGCTTCTTGACAGGGACGACATTGCTACCTTATTCTTCAAGTAACATGGCAACTCTCTCGGCCTCAGCTCCATTTCCAACTATTACTTTGGACTTCACTATTCCTCCAACAACACAACCACCTCCAACCCAATTTCAAATGCCTTTCTCAAATAATGCCTCTCAAGGTTTCACTCAATTTTTGGCTCAAGCTCTTTGTAACAACAATCAATCAAGTTTTTCAGGCCTTCAAACCAGTAACAAAGACCCATTGCAATTGAGTGCTGCTATAGCAGCTAACCCTAACTTCACTGCAGCTTTGACGGCGGCTATCACTTCCATCATGGGCTCTGCCCTGCCAAAGAATGTCAACGGTGACAATAATGTCAATGACAACAATTTTCCACGGAACTAG 1671 0.444 MIIVTRASLRTLGKTCSSIFSAESFASLFQDFTSLPSSLYLMARGVGLSIDSDPPVKAFFFSNPIVFQDEHLQPPMESTFPVEMDFFSDSNSNLKLPSASSSDDFSTPPPHHLDFKLNTGLNLLTTNGDQSLVDGAFDMYSVFKDKRANISESEIAVLRAQLENLTIENHKLEDTLDKVTTEYNDLQMQVHLTMSRHKGSEEADEEPENEGLGGGSGSEEKKQSESNRGSLVPRKFIDLGLASINDGEANNSDEPSLSSSKRRSSESSRSPLEVERRARIGSDKKELIKENESQEEADQKTQKCSPPRNIDDQAEATMRKARVAIRCRSETPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAEGCPVKKQVQRCAEDRTVLVTTYEGTHSHALPPAAMAVAQTTATAARMFLSGSMSSNDGLMNGSFLTGTTLLPYSSSNMATLSASAPFPTITLDFTIPPTTQPPPTQFQMPFSNNASQGFTQFLAQALCNNNQSSFSGLQTSNKDPLQLSAAIAANPNFTAALTAAITSIMGSALPKNVNGDNNVNDNNFPRN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0536 556 ProSiteProfiles WRKY domain profile. 329 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco08g0536 556 Pfam WRKY DNA -binding domain 336 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco08g0536 556 SMART WRKY_cls 334 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco08g0536 556 MobiDBLite consensus disorder prediction 194 311 - -
Acco08g0536 556 MobiDBLite consensus disorder prediction 266 302 - -
Acco08g0536 556 SUPERFAMILY WRKY DNA-binding domain 327 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco08g0536 556 FunFam probable WRKY transcription factor 31 319 396 - -
Acco08g0536 556 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 146 546 IPR044810 GO:0003700
Acco08g0536 556 Coils Coil 148 189 - -
Acco08g0536 556 Gene3D WRKY domain 319 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco08g0536 556 MobiDBLite consensus disorder prediction 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0536 Acco-ChrAcco08 4291526 4293563 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0536 80 546 WRKY Transcription Factor Family AT1G62300 43.195 7.43e-99 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco08g0536 WRKY 1.7e-23 CL0274