Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0535 ATGGCTGCAAGAAGCTCCTTCCTCTGCAATCCCATTGTTCTCAACTCTTTCCCTCTCGAAGACAATCTTCAACCTCCCATGGACTCTAATTCCCTCCTCTCTTTCCCTCCTGAGATGGACTTCTTCACCAACAACCATCTCAAGCCTCCCTCTGCCTCTTCCAGCGATGATTCCTCTACACCTCCTCATCCTCTCGATTTCAAACTCAACACTGGTCTCAATCTCTTGACTACTAGCGGCGACCATTCCGAGGTGGAAGATACGTTTGGCATCTATTCTAATTTTAAAGAGAAACGAGCCAGGACTAGTGAGTTGGAAACAGAGATTGCTGGTCTTCGAGCTGAGTTAGAGAAGATGATGGGAGAGAATCATAACCTGAAAGACACGCTAAATAAAGTTAATACCAATTACAATGCCCTGAAGATGCATATAGACTTTCTCAAGTCTTCTCGAAAGGGCAGTGAGGACACTGACAAACCTGAAGACCAGGTGCCTAATGCAAGTCCAGAAGAAAAGAAAAAGACAGAGATTAACAAAGGAACCTTAGTGCCAAGGAAATTTTTAGATCTGGGATTAGCTTCGATCAATGATGGTGAGGCTAAAAGTGTTGAGCCTTCGCTTTCTTCATCTGTAAGGAGAAGCAATGAGAGATCAAGATCGCCCTTGGAAGTGAAATGTAGCGCCAAAATTGGTTCTGATGAGAAGGAATTCAAAAGAGAAAATGAAATTGAAGAGGAAGCTGACAAGACTCAAAAGTATAGTCCACCCAGAAAAGTTGATGATCGAGTGGAAGCCACTTTGAGGAAGGCAAGAGTTTCAGTCAGAGCTCGTTCAGAAGCACCTATGATTACTGACGGATGTCAATGGAGAAAATATGGGCAAAAGATGGCCAAAGGGAATCCATGCCCTCGAGCTTATTATCGCTGCACCATGGCTGCAGGTTGTCCCGTTAGGAAACAGGTACAAAGGTGTGCAGAGGATCGAACAATCTTGGTGACAACGTATGAAGGAAATCATAACCATGCATTGCCTCCAGCTGCGATGGCGATGGCACAAGCAACAGCAGGAGCAGCAAGGTCATTGCTTTCAGGATCAATGTCAAGCAATGATCGTTTAATTCCTTATTCTTCAAGTAACATGGCAACTCTATCAGCTTCGGCTCCATTTCCAACTGTTACGTTAGACTTGACTCTTCCTCCGACAACACAACCTTCTACCCAATTTCAAATGCCTTTTTCAGATCCTGGTTTCACTCAGGGTTTGACTCAAGCGCTTTGTAAGAGCAATCAATCAAGTTTTGCTGGGCTTCAAATGATGAATAACAAAGACCCTTTGCAATTGAGTGCTGCAATAGCAGCTGACCCTAACTTCACTGCAGCTTTAACGGCGGCTATTGCTTCTATTGTGGGTTCTTCTCTGCCAAAGAATGTGGGCGCTGTCAATAATGGCATTGGCAGTGTTACATCCGGCAACAATAATGGTTCAAAATTTTCAGGAAACTAG 1503 0.4418 MAARSSFLCNPIVLNSFPLEDNLQPPMDSNSLLSFPPEMDFFTNNHLKPPSASSSDDSSTPPHPLDFKLNTGLNLLTTSGDHSEVEDTFGIYSNFKEKRARTSELETEIAGLRAELEKMMGENHNLKDTLNKVNTNYNALKMHIDFLKSSRKGSEDTDKPEDQVPNASPEEKKKTEINKGTLVPRKFLDLGLASINDGEAKSVEPSLSSSVRRSNERSRSPLEVKCSAKIGSDEKEFKRENEIEEEADKTQKYSPPRKVDDRVEATLRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHNHALPPAAMAMAQATAGAARSLLSGSMSSNDRLIPYSSSNMATLSASAPFPTVTLDLTLPPTTQPSTQFQMPFSDPGFTQGLTQALCKSNQSSFAGLQMMNNKDPLQLSAAIAADPNFTAALTAAIASIVGSSLPKNVGAVNNGIGSVTSGNNNGSKFSGN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0535 500 Coils Coil 95 136 - -
Acco08g0535 500 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco08g0535 500 FunFam probable WRKY transcription factor 31 268 345 - -
Acco08g0535 500 Pfam WRKY DNA -binding domain 285 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco08g0535 500 MobiDBLite consensus disorder prediction 201 215 - -
Acco08g0535 500 SUPERFAMILY WRKY DNA-binding domain 276 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco08g0535 500 MobiDBLite consensus disorder prediction 216 259 - -
Acco08g0535 500 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 84 476 IPR044810 GO:0003700
Acco08g0535 500 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco08g0535 500 MobiDBLite consensus disorder prediction 43 66 - -
Acco08g0535 500 MobiDBLite consensus disorder prediction 150 178 - -
Acco08g0535 500 MobiDBLite consensus disorder prediction 200 259 - -
Acco08g0535 500 Gene3D WRKY domain 268 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco08g0535 500 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0535 Acco-ChrAcco08 4282616 4284516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0535 35 469 WRKY Transcription Factor Family AT1G62300 43.636 6.49e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco08g0535 WRKY 5.2e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0535 08 4282616 4284516 Acco08g0535 08 4282616 4284516 ECH