Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0515 ATGTACAACGCTATGATGGATCCTGAGATGATCAGAATCGCTCAGGAGCAGATGAGTCGCATGTCGCCGGCCGAGTTTGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGTTAATGAGGATGGCCTCAGAAAGCATGGAGAACATGAGACCTGAAGACTTCAAACTTGCTGCAGAGCAGTTAAAGCATACTCATCCTGAGCAGATGGCTGAGATTGGTGAGAAGATGGCAAATGCAACACCTGAAGAAATTGCAGCTATGCGTGCCCGTGCTGATGCGCAGATGAAGTATGAAATTAGTGGAGCTGAGATGTTGAAGAAGCAGGGCAATGAGCTTCACAGTCAGGGTAGATTCCATGAAGCTATGCAGAAGTATTGTCTTGCCAAGCAAAACCTTAGACAAATTCCTTCCTCTCAAAGCAGAAAGCTGCTTTTAGCATGCTCGCTCAACTTGATGTCTTGTTACCTAAAGACAGGGCAGTATGATGAATGTGTAAAAGAAGGTTCTGAGGTTTTGGCTTATGAAGCAAAAAATCTTAAAGCTCTTTATCGAAGAGGTCAAGCGTATAAGGAACTTGGTCTACTAAAGGATGCTGTTAGTGATTTGAGCACGGCATGTGAAGTTTGCCCTGATGATGATACAGTTTCAAACCTTTTAAGGGAGACTAAGGAAATGTTGGCAGAGGATGGTGGCGAGCATGCACCTAGAGGATTAGTAATTGAAGAAATAACTGAAGAAGATCAGAATGTTCCAGCACAAAACTCTGGAAGCTCATCTGTTGAGCAAACAGCAGCAAAGCCGAAAACTCCCAATACTTCTTCTAAGAGTTCCAGTACAGTCATCGATGACAATTTAAAATCAAATATGGAAGGTTTAAATGCATTGAAAAATGATCCTGAAGCCATCAGATCATTTCAAAATTTCATTTCAAATGCCGACCCTGCCACTCTTACTTCTTTGAATGCTGGACAATCCAAAGATATGTCTCCTGACATGATTAGAACTGCCTCAAACATGATTAGCAAGATGTCACCACAGGAACTTCAAAAAATGCTAGACATGGCTTCCTCATATCAGGGGGACAACCCATTTTTAAGGGGTTCCCCTAATTCTACTATCAATTCTGGATCAATTCCTCCAAATGTGACTCCTGACATGTTTAAAACAGCTTCTGATATGTTAAGTAAAATGCCACCAGAGGACCTTCAGAAGATGTTTGAAATGGCTTCCTCAATGTCTGGGAAAGCATCTAGTTCATCTTCTGCAGCTGTTGACGAGAATGTGAAAAATGCTGCTCAGTCAAATTTCCCCTCCTCGAATGCTAATGGAAGTAATGCTTTTGCTGAATCAAGTTCTCATGATTCGTTTTTAAATATGAGAAATGCTGCTCCGTCAAACTTCCCGTCCTCAAGTACTGATTTGCAAGAACAGATGAGAAACCAAATGAAAGATCCAGCCATGCGACAGATGTTCACATCAATGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGGGAACAATTTGGCATCAAGCTCTCAGAAGAAGACGCAGCGAAGGCTCAGCAAGCCATGTCATCCTTGTCACCAGAGAACTTGGAAAGAATGATGCGATGGGCTGATCGGGTTCAGAGAGGAGTTGAAGGTGCAAAGAAGACAAAGAATTGGCTACTTGGAAAACCTGGTCTGATATTGGCAATAGTGATGCTCATTTTAGCAGCAATACTTCACCGGCTGGGTTTCATCGGTGGCTAG 1761 0.4253 MYNAMMDPEMIRIAQEQMSRMSPAEFARIQQQMMSNPELMRMASESMENMRPEDFKLAAEQLKHTHPEQMAEIGEKMANATPEEIAAMRARADAQMKYEISGAEMLKKQGNELHSQGRFHEAMQKYCLAKQNLRQIPSSQSRKLLLACSLNLMSCYLKTGQYDECVKEGSEVLAYEAKNLKALYRRGQAYKELGLLKDAVSDLSTACEVCPDDDTVSNLLRETKEMLAEDGGEHAPRGLVIEEITEEDQNVPAQNSGSSSVEQTAAKPKTPNTSSKSSSTVIDDNLKSNMEGLNALKNDPEAIRSFQNFISNADPATLTSLNAGQSKDMSPDMIRTASNMISKMSPQELQKMLDMASSYQGDNPFLRGSPNSTINSGSIPPNVTPDMFKTASDMLSKMPPEDLQKMFEMASSMSGKASSSSSAAVDENVKNAAQSNFPSSNANGSNAFAESSSHDSFLNMRNAAPSNFPSSSTDLQEQMRNQMKDPAMRQMFTSMIKNMSPEMMANMGEQFGIKLSEEDAAKAQQAMSSLSPENLERMMRWADRVQRGVEGAKKTKNWLLGKPGLILAIVMLILAAILHRLGFIGG 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0515 586 SMART tpr_5 180 213 IPR019734 GO:0005515
Acco08g0515 586 SMART tpr_5 103 136 IPR019734 GO:0005515
Acco08g0515 586 SMART tpr_5 146 179 IPR019734 GO:0005515
Acco08g0515 586 SUPERFAMILY TPR-like 101 226 IPR011990 GO:0005515
Acco08g0515 586 MobiDBLite consensus disorder prediction 434 478 - -
Acco08g0515 586 MobiDBLite consensus disorder prediction 249 282 - -
Acco08g0515 586 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Acco08g0515 586 Gene3D Tetratricopeptide repeat domain 89 234 IPR011990 GO:0005515
Acco08g0515 586 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 5 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0515 Acco-ChrAcco08 4135858 4141542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0515 100 229 Calmodulin-binding Proteins AT5G48570 32.353 1.34e-12 68.6