Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0508 ATGTCAGTGGAAATGATGGCAGCTGACCGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTCGCGGTTAGTGTTCCATGCAGCAGCTTACTAACCATAGTGACGGTTAGATGTGGGCATTGTGCCAATTTGCTATCAGTCAATATGGGTGCTTCACTTCAAGCTCTTCCTCCTCATCAGAGTCATCCTCAGTCACAGAAGCAGCATCTGACTTTTGAAGAACCAAGCAACAAAGATCCGGGATCATCCTCAAAAGGCGGCAAGTTAGCTCCATTTGAGTCTGTAGAACATGAGCAGCCTAGGATTCCTGCCATTCGCCCCCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCTGATATCAGCCACAGGGAGGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTCCCTCACATTACCTTTGGACTAAAGCTGGATGGGAACAAGCAAGCCATGTTGGACCAGGAAGAGGGAACTCAAAAGTCTAATGGATTCTACTGA 555 0.4595 MSVEMMAADRVCYVHCNFCNTILAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQALPPHQSHPQSQKQHLTFEEPSNKDPGSSSKGGKLAPFESVEHEQPRIPAIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHITFGLKLDGNKQAMLDQEEGTQKSNGFY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0508 184 CDD HMG-box_SF 115 151 - -
Acco08g0508 184 SUPERFAMILY HMG-box 104 154 IPR036910 -
Acco08g0508 184 Pfam YABBY protein 8 161 IPR006780 GO:0007275
Acco08g0508 184 PANTHER PROTEIN YABBY 6-RELATED 1 170 IPR006780 GO:0007275
Acco08g0508 184 Gene3D High mobility group box domain 98 158 IPR036910 -
Acco08g0508 184 MobiDBLite consensus disorder prediction 57 101 - -
Acco08g0508 184 MobiDBLite consensus disorder prediction 57 85 - -
Acco08g0508 184 FunFam axial regulator YABBY 5-like 99 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0508 Acco-ChrAcco08 4091545 4097868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0508 1 184 C2C2-YABBY Transcription Factor Family AT1G08465 65.241 2.27e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Acco08g0508 YABBY 4e-71 CL0114