Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0503 ATGGGTGTCCCAGGGAAGTGGATTAAAGCTTTGGTTGGTCTAAAGAAATCTGAAAAGGCAGAATCTTCAGATAAGGATGTAAATAGGACTGGAAAAATACGACACCGAAGGAAACAATCCATTGACGTCGAGAATGAAAAACTCCAAAATGAGTTTAATCATGACGCTACTCCTCTTGGAGATGCCAATATCCATTCAGTCGCTGATGTCCAGCATTCACCTTCCACTTCACAACAAGTACAGGATGCCGCATATAGCCATGAAATTATGAAGGAGGAATGGGCAGCAACACGCATTCAAACAGCATTCCGAGGATTTTTGGCCCGAAGAGCGCTACGAGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAGGCACGCGTTCGAGCAAGGCGTGTTCGCATAGCATTGGAAAGTCAATCAGCACAGCAGAAATTTCAGCAACAACTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTAATGAAAAGACAGGAGGCTGCAGCTAAACGAGAGAGAGCAATGGCATATGCTCTGGCGCATCAGTGGCAGGCAGCATCAAGGCTGCAGGCTGCTTCTTCTGGATTTGAACCAGATAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTCCGGCCTTGGGAGAACCGTTTTCTTGACATTAATACAAGGGATGGAGTAATGGTCAGTGAAAATGGATCAGTGGAGAGTAAAAATGGAATCAGATCTCAATTAAGATCTGCTAGCAAGAAATCAGTTCTGCCAGATATTCATCCAAACCTCACCAGTCAGATAACCGGGCCATCTCTATCTGATGGTGGTGACTCTTCACCTAGTAAGTCTGCTGGTTTGCTGGAGGCATCAAAAACACAGATTAAGATAAAATCTAATGCAAAAGTTGAAATTGAAGAAGCCAACTCAAGACCTGGGCCTGGTTCGAGATCTCATAGTAATCCGAAGGAGAGAATCACACAAGCTGATAAACAGGCCAAAAAACGATTATCTCTTCCTAACAATGGGGGAAGCGCTGGGGCTCAAACAACCAGAAATCCTGCCAGAACTAATGTGAAGGGAACAATCAGCACTCAAAAAGCCCTTCGTGATAAAGCTAAGCTCAGTGGAAGAGGAGGGGATGTGAATTCAACAAAAGCTGTTCCTCAACAGGAAGAAATGTAA 1302 0.4485 MGVPGKWIKALVGLKKSEKAESSDKDVNRTGKIRHRRKQSIDVENEKLQNEFNHDATPLGDANIHSVADVQHSPSTSQQVQDAAYSHEIMKEEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESQSAQQKFQQQLANEARVREIEEGWCDSMGSVEEIQAKLMKRQEAAAKRERAMAYALAHQWQAASRLQAASSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVSENGSVESKNGIRSQLRSASKKSVLPDIHPNLTSQITGPSLSDGGDSSPSKSAGLLEASKTQIKIKSNAKVEIEEANSRPGPGSRSHSNPKERITQADKQAKKRLSLPNNGGSAGAQTTRNPARTNVKGTISTQKALRDKAKLSGRGGDVNSTKAVPQQEEM 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0503 433 MobiDBLite consensus disorder prediction 18 45 - -
Acco08g0503 433 FunFam IQ-domain 11 91 142 - -
Acco08g0503 433 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Acco08g0503 433 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Acco08g0503 433 SMART iq_5 91 113 IPR000048 GO:0005515
Acco08g0503 433 SMART iq_5 114 135 IPR000048 GO:0005515
Acco08g0503 433 MobiDBLite consensus disorder prediction 373 404 - -
Acco08g0503 433 Gene3D - 90 141 - -
Acco08g0503 433 MobiDBLite consensus disorder prediction 277 324 - -
Acco08g0503 433 PANTHER IQ-DOMAIN 5-RELATED 1 384 - -
Acco08g0503 433 MobiDBLite consensus disorder prediction 338 433 - -
Acco08g0503 433 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0503 Acco-ChrAcco08 4042780 4048705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0503 1 412 IQD Protein Family AT3G22190 58.273 1.64e-134 391