LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco08g0488	ATGGAGGATGTTGGATTTGTGAATGATGTAAGGAGTTTAATCTTGAAATTGGGATGTGTTCCTGGTGTTCTTTTATCTGAAGATTATTCAACAAAAGCTTCTGCTGAAGGTTTTGGTGCAACTGTTACTGGTGGGGTGCCTGTGTCAGTAGATCCGCCTGTTGTTACCTCAAATTGCAGCCCCTCTGCAACTAGTGGCTCCAACCAACAAAGCAATTCACCTCACACTTCAAACTCCTTTGTTCACCAATCTCTACCACACTGGGAAGAGATAAATAATGACCAGGTTTCTGTATTAACACATCAAACCCCTAACCTGGCTCAGATGTTGTCCAAGTACCATGATAATCTCTGCCAACCTAAGGCAATTCCATTAACAAAACCAAACTTTACTGGCTCTTCTGATAATGGTGTTGTGGAGGCACAATTGATACCCTCAAATCTTAAATTGTGTCCCCAACAATCTTCTGTTTTTTGTAATTCAAGATCTGCATTCAATGAGTTGAATGGGGTTGGCCAATCAAGTCTGAGTGACCGTGGTATGAAGTTTAATGAACAACTAACTTCATCAGGCAGTGGGAATCAGAATTACGTCAATTCTCTCATAAATGTGCCAGGCGGAAGCCTTATGCCTGATTATTGTCAAAATTCTGTTAGTACTCCATTACTTGGAGGAATCCCAATTCGTGGTGGAATGAGTCACCTGTTAAGGTCAAGCTTGATTAATACCTCTGTTTCAGAACCTCCCAAAGTTGGTGTTGCTGATTTTGCTGAAATACATAAAGTCATGACTGGACTTCAAAATGATGATTCAGCTAAGACGGGGGCTTTTTCTCTCCCTTGTGTGGCAAACCAATTAGATGCTCTTCACAGACCTCTAGAAAGCTCTTATCAGAAGAATCTTTCCCTTGATTTAAAGTGTACACGTGACAAGTTGGGTTCAAATGATCAGATGATATGTGGTCCATCTCTTCATCCTGAGGAGCATGTGCCTGTGTGCGATCAAATTCTGGGTTTTGGAAATGGTTCCCTCAATAATGATGTTACAAGTCAATCTTTCACAAAACAAGAAGCTTATGCTCAATCTTCATCAGGAGATGACCTGTTTGATGTTTTAGGTGTGGATTTTAAAAACAAAATACTGAGTGAAAACTGGAATAAGTTGCTTCTAGATGAATCAGATGTCAATCTGCAAGTCCTGGATAAAAAGGCAGCATGTATGAATATGCAGAGCTTAGATGCTGATTGCTATTCCATTAATGAAACAGTATCTGATAGTGGCATTTTCTCCGGGAGGGGCACTGATCACCTTTTGGATGCTGTGGTCTCACGAGTTCAATCTGCTGTGAAACAGGATTCTGATGATATGTCTTGTAGGACAACAGTGACTAGAATCAGCAGTGCCTCTGTGCCCTCTTCTTCCTACAGGCAAGTTATGTCTGATCATGCCCTTGGTGCAATGTTGAACTTTCCCAAGACTGGAAGTAAATTAAGTGCTGCAGAAACTTGTTCTCTTCAGTCTGGACGTCACAAGGATGATGCTGGAAACTGTTCTCAAACTACTTCCTTTTATGGGTCTCAACTCAGTTCATGGGTTGAGAATGTTAGCAATGTCAAGCGCGAAAACAGTGCTTCAACTGGTTACTCTAAGCGACCAGATGAAGTTGGCAAATCGAACCGCAAAAGGCTTAAACCTGGAGAGAACCCAAGACCTCGACCTAAGGATCGCCAAATGATTCAAGACCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATAGCGCTAAATGTAGCATTGATGCGCTTCTTGAACGGACCATAAAGCACATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGATAAGCTGAAACAAACAGGGGATTCCAAGATCATTAATAGGGAAGACGGGCTGCTTCTGAAAGATAATTTTGAAGGAGGGGCTACATGGGCATATGAGGTTGGCTCACAATCAATGGTTTGCCCTATCATAGTTGAGGATCTTAATCCGCCTCGTCAGATGTTAGTGGAGATGCTTTGTGAAGAACGTGGTTTCTTTCTGGAGATAGCTGACTTGATCAGGGGAATGGGTTTGACCATTTTAAAGGGGGTAATGGAAGCTCAAAATGACAAGATCTGGGCACGATTTGCTGTGGAGGCGAATCGGGACGTGACAAGGATGGAAATATTTATGTCACTGGTTCATCTTCTGGAACAAACAGCAAAGGGTGGTGGTGCATCTACATCAAATGAAATCAGCAACAACATGATGGTTTATCACTCCTTCCCAGAAACTACTCAGATACCAGCAACTGGGAGACCTAGTAGTTTGCAATGA	2334	0.4216	MEDVGFVNDVRSLILKLGCVPGVLLSEDYSTKASAEGFGATVTGGVPVSVDPPVVTSNCSPSATSGSNQQSNSPHTSNSFVHQSLPHWEEINNDQVSVLTHQTPNLAQMLSKYHDNLCQPKAIPLTKPNFTGSSDNGVVEAQLIPSNLKLCPQQSSVFCNSRSAFNELNGVGQSSLSDRGMKFNEQLTSSGSGNQNYVNSLINVPGGSLMPDYCQNSVSTPLLGGIPIRGGMSHLLRSSLINTSVSEPPKVGVADFAEIHKVMTGLQNDDSAKTGAFSLPCVANQLDALHRPLESSYQKNLSLDLKCTRDKLGSNDQMICGPSLHPEEHVPVCDQILGFGNGSLNNDVTSQSFTKQEAYAQSSSGDDLFDVLGVDFKNKILSENWNKLLLDESDVNLQVLDKKAACMNMQSLDADCYSINETVSDSGIFSGRGTDHLLDAVVSRVQSAVKQDSDDMSCRTTVTRISSASVPSSSYRQVMSDHALGAMLNFPKTGSKLSAAETCSLQSGRHKDDAGNCSQTTSFYGSQLSSWVENVSNVKRENSASTGYSKRPDEVGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNSAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKIINREDGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGMGLTILKGVMEAQNDKIWARFAVEANRDVTRMEIFMSLVHLLEQTAKGGGASTSNEISNNMMVYHSFPETTQIPATGRPSSLQ	777

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco08g0488	777	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain profile.	563	612	IPR011598	GO:0046983
	Acco08g0488	777	MobiDBLite	consensus disorder prediction	553	578	-	-
	Acco08g0488	777	CDD	bHLH_AtLHW_like	567	636	-	-
	Acco08g0488	777	MobiDBLite	consensus disorder prediction	540	578	-	-
	Acco08g0488	777	PANTHER	TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED	1	771	IPR043561	GO:0003700\|GO:0006355
	Acco08g0488	777	MobiDBLite	consensus disorder prediction	50	80	-	-
	Acco08g0488	777	MobiDBLite	consensus disorder prediction	53	80	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco08g0488	Acco-ChrAcco08	3851271	3854705	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco08g0488	361	771	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT2G27230	52.174	2.69e-121	377