Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0482 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAGCAGATCGGTCGGGGAGCTTTTGGAGCTGCTATTTTGGTCCATCACAAGGCTGAGAAAACGAAATACGTGTTGAAGAAAATCAGGCTTGCGCGACAGACTGAACGGTGCAGGAGATCTGCTCATCAAGAGATGGCACTTATTGCCCGAATACAGCACCCTTACATCGTGGAATTTAAGGAGGCTTGGGTCGAGAAGGGTTGCTATGTCTGCATTGTCACTGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATCAAATGGGGTTCACTTTCCTGAGGAGAAACTCTGCAAGTGGTTTACTCAGTTACTGTTGGCAGTGGAATACTTGCATGCTAACTATGTTTTACATCGAGACCTGAAGTGTTCCAATATCTTTCTTACCAAGGATCGTGATGTTCGCCTAGGGGATTTTGGGCTTGCCAAGACCTTAAAAGCAGATGATCTGGCTTCTTCGGTGGTAGGAACTCCCAATTACATGTGTCCTGAATTACTTGCTGATATTCCTTACGGATTTAAATCTGATATTTGGTCATTAGGTTGCTGTATATATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTCGATATGGCAGGATTGATAAGCAAGATAAATCGTTCCTCCATTGGTCCTTTGCCTCCCTGTTATTCCCCATCTTTGAAAACACTGATAAAGGGTATGCTGAGAAAAAACCCTGAGCATCGACCGACAGCATCTGAGATCTTAAAGCATCCTTATTTGCAATCTTATGTTGAACAGTATCGTCCATCTTTCAGTCCTCCAACATCCTCTTCTCCTGAAAAGCCTATTCCTGTTTCCCATGATCCTCGAAGAAATATGGCTGACAGTCGAAACAGTAGCAGTTCAAGCAGTGACAAAGATAGTTCAATGTCAAATGACAGAATCATTTCAGCAGTGGTGCAGAAGTGCGATAACAAAACCACTGAGACAGATATAACCTCCATGGATGATGAGGATGGCTCTGAGCATATCCTGCCTAGCGAAGAAGATACTAGCTCCAGCACTAGCAATGCCAAAGCTGATTGTCAGGAGGTGATGAAACCATCATCTAATGAATGTCAATCAATTGTTGAATCTAAGCAACCAAAAGCAATTAAAAACATAATGATGGCTCTTAAAGAAGGAAAAGTTAGAGAAAGTGGTTCTCCAATGAGGGGCACCCGCATTAAGGCAGTTGGTGCATCAGCCCAGAAAACAAACGCTGATACATTGCCTAAATTGCCCAAGTCTAATGCTGTTGCTCCTGGTATCAAGCCAAATTTAGAGTCTCCAACTTTGATATCTGCAAAGACATCCCCTGATCCTCCAAAACGAATGCCAAGATCACATCCTTTAAAGAATCAGGCTCTACTGATGATGGACTCTTCACCAAAAACTAAACCCAGACACGATGGGACTCCCCCATCTTGTCCAATTAAACAAGTTGAAGGAGATGGAGTTTCTGCCAAGGTTAGGCAAGGGACCCCCCCTAGTTTACTGAGACAACCTTCATTTCGAGGAGGAATGAGGCAGGTTGGGCTTGATGTACGCAATGCAGCAAATGATACAGAGAAGTTTGGTCCAAAAAAAATATCACCGGAGCCAGACAAGAGTCATTATAAGGCGCTCAATGGTCATATACCACATGCTTCTAGAGAGGTTACAGGGTCTCAGAAGGCTTCTGAAAAATGTTCCAAAGGAATGCAGAATGATAGCAGTAATTCTGTTTCATCTTCAGTGTCTATTCAAGGATGTGAACTTTCAGATGATGCCACTAATTTTATTGACATGGGAGAACAGACACCTTCTGATCATGGGAGTGGGACACATATTGAAACTATTAAGTCACATTCAGACAAGATTCCTTATCAGTCAGCCAATGGTCATATACCACAGGCTTCTGGGGAGATTACTGAGCCTCAGAAGGCTTCTGAAAAATGTCCCAAAGGAATACAGGCAGATAGCAGTAATTATGTTTCATCTTCACTGTCTATTCAAGGATTTGAACTTTCTGATGATGCCAAAAATTTTATTGACATGCGGGAACAGGCAACTTCTGATCATGGGAGTACAACACATAATGAAACTATAAAATCACATCCTGACAGCAGCCCACCTGCTACCTTTTTACCCTGTGAGATGGCTGAAACTGTGTCCATGGAAGCCTCTGAACCCACCTTGAATCTTCAGAATACAATTACTAATAATGAGAAAGGAAGTTCTGGTTTAACTCTTGATCACCATGCTCCAGATTCCAGTGAAATATTGGCTTTTGAAGACAGTCTCCACATCAATCAGACAAGTACTCCCACTATTATAGGCAGTGAAGAAATCCAAGATCTTCAAGATACTACTCGGCAAGTGACTTCAATCCATCCTCCAAAGCTTCCCCTATTGAGTGCTGGAGAAAAGTTTGTTTGCGAAGAAGTCGCTCCAGTAAGCAAGCCTGGTAAAAGGCCCGACATAGTAAGCCAGCTAAAACCCATGCTTGAGTCCTCTGGCGATGACAAATTCACTGTAAGAGAAAGACTCTCATCTGCGGCCGATACTACTCTCCCAGTCATCTCTACCAATGACCAAAAAGGCTTGCAAGAAGATAAAGGAACCATTTTGCATAATCCAGTGATAGAAAGGCCAGCTGTTGGTAATCTTCCTCCAGCTTTTGATGATGTCATCCATGTTATACGGCATAGCAGTTACCGAGTTGGGAGTGAGCAACCAGTAAAGGAATCTGTGGAGATGGGAGTTCAAAATGTGGATGTTGGTAAATTTCTCAAAGTTGTGAGAGATGATTTAGAAATGAGAAACATGGGCATTCCTCTGACCCATAATTCTTCAAATTGCTCTGAAGCTGCGAGCTTGAAGTCGAACATTTCTGATCAATCAGATGTGAGAAGCACGATCATTGCTCCAGCTGTAAAACCCTCGAGTTGCTCTGATGCTTTGTGCACGAAGCCAAGTGTCCCTGATCATTCCAGTGTCAAGGAACAAGACGTGAAAAATCTTGCTTCCCTAGTTTCAAAATCCGATTCCCCTGAGCTAACCAAATGTAACTCTTCAGTGACCGAAGAGGAAACCCCAGCCAAGGAAACTTTGGATGTTAAATCATTCAGGCAGAGAGCAGATGCTCTGGAAGGGCTCTTGGAGTTGTCTGCAGAGTTACTGCAGCATAATAGATTGGAGGAGCTCGCTGTTGTTCTAAAGCCCTTTGGGAAAGATATGGTATCCCCAAGAGAGACAGCCATTTGGTTGGCTAAGAGCTTAAAGGGAATGATGAGCGATGACCATAGTGGACGTTGA 3345 0.4329 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKTKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVHFPEEKLCKWFTQLLLAVEYLHANYVLHRDLKCSNIFLTKDRDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEILKHPYLQSYVEQYRPSFSPPTSSSPEKPIPVSHDPRRNMADSRNSSSSSSDKDSSMSNDRIISAVVQKCDNKTTETDITSMDDEDGSEHILPSEEDTSSSTSNAKADCQEVMKPSSNECQSIVESKQPKAIKNIMMALKEGKVRESGSPMRGTRIKAVGASAQKTNADTLPKLPKSNAVAPGIKPNLESPTLISAKTSPDPPKRMPRSHPLKNQALLMMDSSPKTKPRHDGTPPSCPIKQVEGDGVSAKVRQGTPPSLLRQPSFRGGMRQVGLDVRNAANDTEKFGPKKISPEPDKSHYKALNGHIPHASREVTGSQKASEKCSKGMQNDSSNSVSSSVSIQGCELSDDATNFIDMGEQTPSDHGSGTHIETIKSHSDKIPYQSANGHIPQASGEITEPQKASEKCPKGIQADSSNYVSSSLSIQGFELSDDAKNFIDMREQATSDHGSTTHNETIKSHPDSSPPATFLPCEMAETVSMEASEPTLNLQNTITNNEKGSSGLTLDHHAPDSSEILAFEDSLHINQTSTPTIIGSEEIQDLQDTTRQVTSIHPPKLPLLSAGEKFVCEEVAPVSKPGKRPDIVSQLKPMLESSGDDKFTVRERLSSAADTTLPVISTNDQKGLQEDKGTILHNPVIERPAVGNLPPAFDDVIHVIRHSSYRVGSEQPVKESVEMGVQNVDVGKFLKVVRDDLEMRNMGIPLTHNSSNCSEAASLKSNISDQSDVRSTIIAPAVKPSSCSDALCTKPSVPDHSSVKEQDVKNLASLVSKSDSPELTKCNSSVTEEETPAKETLDVKSFRQRADALEGLLELSAELLQHNRLEELAVVLKPFGKDMVSPRETAIWLAKSLKGMMSDDHSGR 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0482 1114 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Acco08g0482 1114 Gene3D Transferase(Phosphotransferase) domain 1 90 339 - -
Acco08g0482 1114 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0482 1114 MobiDBLite consensus disorder prediction 699 721 - -
Acco08g0482 1114 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 1064 - -
Acco08g0482 1114 MobiDBLite consensus disorder prediction 562 593 - -
Acco08g0482 1114 MobiDBLite consensus disorder prediction 297 330 - -
Acco08g0482 1114 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Acco08g0482 1114 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Acco08g0482 1114 MobiDBLite consensus disorder prediction 270 360 - -
Acco08g0482 1114 MobiDBLite consensus disorder prediction 569 593 - -
Acco08g0482 1114 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Acco08g0482 1114 MobiDBLite consensus disorder prediction 477 520 - -
Acco08g0482 1114 CDD STKc_Nek 7 262 - -
Acco08g0482 1114 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0482 1114 SUPERFAMILY Protein kinase-like (PK-like) 4 317 IPR011009 -
Acco08g0482 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Acco08g0482 1114 MobiDBLite consensus disorder prediction 704 718 - -
Acco08g0482 1114 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0482 1114 MobiDBLite consensus disorder prediction 414 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0482 Acco-ChrAcco08 3790419 3796624 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0482 14 264 MAP Kinase Kinase Kinase AT1G53570 31.250 3.32e-36 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Acco08g0482 Pkinase 4.5e-65 CL0016