Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0452 ATGGACTTCTTCTCTATCAACAACAATCTCAAGCCTTCGTCTTCCAGCGATGATTCCTCTCCTCATCCTCTTGACGTCAAACTCAACACTGGTCTCAATCTCTTGACTATTGACCACGGCGGCAGCGGCAGCAATGCTTTTGACCTATATTCTAATTTTAAAGAGAAACGAGCCAATATCAGTGAGTTGCAGACTGAGATCGCTGTTCTTCGACCCGAGATAGAGAAGAAGACGAGAGAGAATCATAAGCTGAAGGAATCGCTAAATAAGGTTAGTACCGATTATAATGCCCTGAAGATGCATATGGACTTTCTCCGGTCTCACAAGGGTAGTGAGGACGCTGATCAGAAACCCGAAAACAGAGAGCTTGATGCAAGTTCAGAAGAAAAGAAACAGAGTGAGAAAAACAGAGGAACTTTAGTGCCAAGGCAATTTATAGATCTTGGATTAGCTTCGATTAATGATGGTGAGGTTAATGATGGTTATGACGATGATGAAGATGATGAACCTTCGCTTTCTTCGTCCTTAAAGAGAAGAAATGACAGATCAAAATCACCACTGGAGGTGGAATGTAGCACCAGAATTGATTCTGATAAGAAGGAATTCAACAAACAAACTGAAATTAAAGAAGAAGCTGACAAGAATGTTATTAATCAAAAGTATAGTCCTCCCAGAAATGCTGACATCGATCAATTGGAAGCCACTATGAAGAAGGCAAGAGTTGCAGTTAGAGTTCGTTCAGAAGCATCTATGATTACTGATGGATGTCAATGGAGAAAATATGGGCAGAAGAAGGCCAAAGGAAATCCATGCCCTCGAGCTTATTATCGCTGCACCATGGCTTCAGGTTGTCCTGTTAAGAAACAGGTGCAAAGGTGTGCAGAGGATGAAACAGTGTTGGTAACAACGTATGAAGGAAGTCATAACCACGCATTGCCTCCAGCAGCAATGGCAATGGCACAAACAACAGCATCAGCAACAAGGACGTTGCTTTCAGGATCAATGTCAAGTAATGACGGCCTAATGAATGGAAGCTTCTTGACGAGGACGACATCGCTTCCTTGTTTTTCAAGTAACATGGCTACTCTCTCGGCCTCAGCTCCATTTCCAACTATAACGTTAGACTTAGCTAACCCTCCACCAATGCAACAACCTTTTACTGACAAATTTCAAATGCCTTTATCAAATAATGCACCTCATCATCATGATTTCACTCAAGTTTTGCCTCAAACACTTTGTAGCAGCAGTCAAACAAATCTTTCAGGACTTCAAACCAGTAACAACAACCCCTTACAATTGAGTGCTGCTATAGCAGCTGACCCTAACTTCACTGCAGCTTTAACGGCGGCTATTACTTCTATTATCGGTTCTGCTATGCCAAACAACGCCCGCGTCTTCCTTCTTCGACTCGATGAAAGACCCTCAAGCATGGTAGGTAGTAGTGAAGACCTTCAGGTTTGGGAAGATCTTCACTGCCACCTACCGTGCCTGAGGGTCTTTAATGGAGTCGAAGTAGGAAGAGGAGTGCCTCCTCGAACATGGAGGAGGATGAAGCTCATGGCACAGTCCCTTCGTAATGGTCAAACATGGATCAAGATCCTGTGA 1605 0.4336 MDFFSINNNLKPSSSSDDSSPHPLDVKLNTGLNLLTIDHGGSGSNAFDLYSNFKEKRANISELQTEIAVLRPEIEKKTRENHKLKESLNKVSTDYNALKMHMDFLRSHKGSEDADQKPENRELDASSEEKKQSEKNRGTLVPRQFIDLGLASINDGEVNDGYDDDEDDEPSLSSSLKRRNDRSKSPLEVECSTRIDSDKKEFNKQTEIKEEADKNVINQKYSPPRNADIDQLEATMKKARVAVRVRSEASMITDGCQWRKYGQKKAKGNPCPRAYYRCTMASGCPVKKQVQRCAEDETVLVTTYEGSHNHALPPAAMAMAQTTASATRTLLSGSMSSNDGLMNGSFLTRTTSLPCFSSNMATLSASAPFPTITLDLANPPPMQQPFTDKFQMPLSNNAPHHHDFTQVLPQTLCSSSQTNLSGLQTSNNNPLQLSAAIAADPNFTAALTAAITSIIGSAMPNNARVFLLRLDERPSSMVGSSEDLQVWEDLHCHLPCLRVFNGVEVGRGVPPRTWRRMKLMAQSLRNGQTWIKIL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0452 534 SMART WRKY_cls 252 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco08g0452 534 FunFam probable WRKY transcription factor 31 237 314 - -
Acco08g0452 534 MobiDBLite consensus disorder prediction 156 225 - -
Acco08g0452 534 ProSiteProfiles WRKY domain profile. 247 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco08g0452 534 MobiDBLite consensus disorder prediction 109 137 - -
Acco08g0452 534 Gene3D WRKY domain 237 314 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco08g0452 534 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 58 458 IPR044810 GO:0003700
Acco08g0452 534 MobiDBLite consensus disorder prediction 1 24 - -
Acco08g0452 534 Pfam WRKY DNA -binding domain 254 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco08g0452 534 MobiDBLite consensus disorder prediction 109 141 - -
Acco08g0452 534 MobiDBLite consensus disorder prediction 171 216 - -
Acco08g0452 534 SUPERFAMILY WRKY DNA-binding domain 244 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco08g0452 534 Coils Coil 74 94 - -
Acco08g0452 534 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0452 Acco-ChrAcco08 3612237 3617378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0452 28 455 WRKY Transcription Factor Family AT1G62300 42.733 5.61e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco08g0452 WRKY 6.3e-24 CL0274