Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0445 ATGGAGGTACCTTACCCTGGTTTTCGTTTCTACCCTACAGAAGAAGAGCTTGTCTCATTCTACCTCCACAACAAGCTTCAAGGTCTCAGATCCGACATGGACAGAGTCATCCCTGTTGTTCAAATCCACGACGTCGAGCCTTGGAACCTCCCACAGCTTGCCGGAGAGGTGTGTCGTGGAGATACAGAGCAGTGGTTCTTCTTCTCGCCGAGACAAGAAAGAGAAGCCAGAGGAGGGAGGCCCAACAGAACCACTGCTTCCGGATACTGGAAGGCCACCGGTTCTCCTGGTTACGTCTACTCTTCCGATAACAAAGTCATCGGCGTTAAGAAAACTATGGTCTTTTATAGAGGCAAAGCTCCCACCGGAAGAAAAACCAAGTGGAAGATGCATGAATACAGAGCCATTGAACCTTCCAACTCTAACCAATCCACCACCTCCATTCCCACGTTGAGGCACGAATTCAGCTTGTGCCGAGTTTATGTGATATCGGGGAGCTTCAGGGCATTTGATCGGCGGCCATTAGAGGCGGGGTTTCAAGGCGACGGAGCTTCTGGTTCGGGTGCTGCAACTGGTATTCATGAGGAAGGTGGAAGAAGCTCGTCGGACACATCAAACTCAGGAGCAGAGCATGCAGAAGCAGGAGGAGGATCGAGTAGTACCAATCGGAATAATGCGAATGACGAGGAGACTGTACAAGAGCCTCTGTGGGAATGGGAACAGCTAAATTGGCTTTGA 738 0.5068 MEVPYPGFRFYPTEEELVSFYLHNKLQGLRSDMDRVIPVVQIHDVEPWNLPQLAGEVCRGDTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGYVYSSDNKVIGVKKTMVFYRGKAPTGRKTKWKMHEYRAIEPSNSNQSTTSIPTLRHEFSLCRVYVISGSFRAFDRRPLEAGFQGDGASGSGAATGIHEEGGRSSSDTSNSGAEHAEAGGGSSSTNRNNANDEETVQEPLWEWEQLNWL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0445 245 Pfam No apical meristem (NAM) protein 6 134 IPR003441 GO:0003677|GO:0006355
Acco08g0445 245 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Acco08g0445 245 MobiDBLite consensus disorder prediction 197 231 - -
Acco08g0445 245 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Acco08g0445 245 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 199 - -
Acco08g0445 245 MobiDBLite consensus disorder prediction 178 237 - -
Acco08g0445 245 Gene3D NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0445 Acco-ChrAcco08 3542032 3542996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0445 7 244 NAC Transcription Factor Family AT5G22380 60.251 7.41e-94 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco08g0445 NAM 2.4e-33 No_clan