Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0432 ATGGAAGATTCCAGATCTACAACGACAAATCCTCCTCTTCCTCCTCCAGCTTCGCTTTTCACAGACACTGCTCCGGCCGCGGCGAAGAAGCCGAATGAGTTGTTGCCGTCGCCGTCAAGTTCTGAAGGAGATGCCGGACGCGAGAGGCTCAAGAGGCACAGGGACGAGGTAGCAGGGAAGGTGAAGATTCCTGATAAATGGGGTAAGGAACAGATGATGAAGGATTGGACCGAGTTTTCTACGTTCGATGCACTCCTTGGTTCTCACCGAATGATTATCGCTGCTCGTGATGCGCTTATTGCCGATGCAAGGAAAGCCAAGTCTCCCAGATTAAGGATACAGAGTAATTCCCCCATCTTCAGAAGGGTTTCCAGGACTTGTTATATTGCCACCAGAAAACCCTATCTTGCATTCTGGCTGCATTGCTCGCGTGCCGCCTTGTGCTGGAGAAGATCTGTATCCGCTTTGTCGGTAAAGCCAAAGATAGAAAATGAGCCCATTAGTTCTATCCAAGCCCGTCAAAGTTGCATTGTTGGAGGATTCATAGACACTGTTCGAAATATTATCTCGTTTTCTGATACTAAGCTTCAGAGTGATGCTTTGAGAGAAGCAATCTCAAACATCAAGAGGGATTCCAGTGAGAAAAAACGTAATTTTGTGGAGACCATTGAACTTCAGATTGGGCTGAAAAACTATGATCCTCAGAAGGATAAGCGTTTCAGTGGTTCTGTTAAGTTGCCTCACATTCCTCGCCCCAAGATGAAAATCTGCATGCTGGGAGATGCTCAACACGTAGAAGAGGCTGAGAAGATAGGGCTAGACTATATGGATGTTGAAGCGCTGAAGAAGCTGAACAAAAACAAGAAACTGGTTAAGAAACTTGCCAAAAAATTTCATGCCTTTTTAGCTTCTGAAGCTGTCATTAAGCAGATTCCCCGTCTTTTGGGTCCTGGTCTCAACAAGGCAGGGAAGTTCCCCACACTTGTTACTCACCAAGAATCTCTTGAGTCTAAGGTTAATGAGACCAAGGCCATGGTGAAGTTTCAGCTAAAGAAGGTGCTTTGCATGGGAGTTGCTGTGGGTAATGTCGGCATGGAGGAAAAACAAATTTTCCAAAATGTACAAATGAGTGTCAACTTCCTTGTTTCCTTGTTGAAGAAAAACTGGCAGAACGTCAGGTGTTTGTATCTCAAGAGCACAATGGGGAGATCCTATCGCGTCTTTTAA 1227 0.4548 MEDSRSTTTNPPLPPPASLFTDTAPAAAKKPNELLPSPSSSEGDAGRERLKRHRDEVAGKVKIPDKWGKEQMMKDWTEFSTFDALLGSHRMIIAARDALIADARKAKSPRLRIQSNSPIFRRVSRTCYIATRKPYLAFWLHCSRAALCWRRSVSALSVKPKIENEPISSIQARQSCIVGGFIDTVRNIISFSDTKLQSDALREAISNIKRDSSEKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKFHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVGMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGRSYRVF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0432 408 FunFam Ribosomal protein L10a 193 311 - -
Acco08g0432 408 CDD Ribosomal_L1 201 407 IPR028364 -
Acco08g0432 408 SUPERFAMILY Ribosomal protein L1 217 408 IPR023674 -
Acco08g0432 408 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 203 402 - -
Acco08g0432 408 Gene3D - 212 402 - -
Acco08g0432 408 ProSitePatterns Ribosomal protein L1 signature. 308 327 IPR023673 -
Acco08g0432 408 Pfam Ribosomal protein L1p/L10e family 215 402 IPR028364 -
Acco08g0432 408 FunFam Ribosomal protein 329 406 - -
Acco08g0432 408 FunFam Ribosomal protein 257 346 - -
Acco08g0432 408 CDD BIC1_CID 46 102 - -
Acco08g0432 408 Gene3D - 257 346 IPR016095 -
Acco08g0432 408 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0432 Acco-ChrAcco08 3438942 3444378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0432 194 408 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 88.837 1.01e-124 357