Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0427 ATGGAGAGTCACAGACTAGGACAGACTGGTTTGTCTGAGTCATCGCCTTCAGGTCATCACTATGGAGTACTTCACGGAATCAATAATAATACTCCTGCATCAGCAGCAGCATCCACCTTAATCAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTGCAAGGAGTAGAGATTAGAAATGATGAAGGCAGAGCACCTTTTTTCACATCCAGGCCTGCAGCTACTACTCTGGAAATGTTCCCCTCTTGGCCAATCAGATTTCAGCAAACCCATAGAGTAGTAGGAGGATCAAAGTCAGGAGGTGAAAGCACTGATTCAGGATCTGGTGTTAACACCATATCAAGCAAAAGTGAACCTCACTTTGAATTTGAACCAGAATCTCCCATTAGTAATAAGAAAGCTTCTGCTTCATCTTCAGAACTTCATCATCTGAAGCAAGTGATGGCAAGTGGTGGTGCCTTAAGAACAGGCCCATCACAGAATCAATCACCTGCCAAATCGCCTCAGGAAAAGAGGAAAGTGGATGGTTCCTCATCATCAGAAAAACAACTTGATGCAAAGACACTGAGACGTCTAGCTCAGAACAGAGAGGCTGCTCGAAAGAGCCGTCTGAGGAAAAAGGCTTACGTGCAGCAGTTAGAATCGAGTAGGATAAAGCTTACACAGCTTGAACAAGACCTTCAAAGAGCACGCTCTCAGGGACTATTCTTAGGCTGTGCTGGTGCTGGCGGCAACATAAGCTCTGGAGCTGCAATATTTGACATGGAATATGCAAGATGGTTAGAGGAAGACCACCGGCACATGACGGAGTTAAGGGCAGCACTACAAGCGGGGTTATCGGACGGCGAGTTAAGAATAATGGTGGATGGATATCTGTCACATTACGATGAGATCTTCAGGCTCAAAGGTATCGCTGCAAAAACAGACGTGTTTCATCTCATTACAGGCATGTGGACTTCTTCTGCTGAACGTTGCTTCCTTTGGATGGGTGGTTTCAGACCCTCTGAACTCATCACGATGTTGATACAGCAGTTAGAGCCACTGGCTGAGCAGCAGATTATGGGAATGTATGGTCTCAGACATTCCTCACAGCAAGCAGAAGAGGCTCTCTCTCAAGGCCATGAGCAACTCCAACAGTCCCTTGTCGACACCATCGCCGGCGGACCCATCGGTGATGGCGTGCAACAGATGGTCATCGCCATGAGCAAGCTATCCAATCTTGAAGGATTCGTCCGACAGGCGGACAACTTGAGGCAACAGACACTGCACCAGTTATGTAGATTGCTGACAATAAGGCAAGCAGCTAGATGCTTCCTTGTAATGGCTGAGTATTATGCTCGCCTTCGTGCCCTTAGTTCTCTTTGGGCTTCCAGACCTCGAGAGACGATGATGAACGACGAGAACTCGTGCCAAACGACAACGACGGAATTTCAAATGGTGCAACCGCCTCCTCCTCCTCATCATCATCAGAATCATTTTGCTGGTTTCTGA 1506 0.4721 MESHRLGQTGLSESSPSGHHYGVLHGINNNTPASAAASTLINQGSAFDFGELEEAIVLQGVEIRNDEGRAPFFTSRPAATTLEMFPSWPIRFQQTHRVVGGSKSGGESTDSGSGVNTISSKSEPHFEFEPESPISNKKASASSSELHHLKQVMASGGALRTGPSQNQSPAKSPQEKRKVDGSSSSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLGCAGAGGNISSGAAIFDMEYARWLEEDHRHMTELRAALQAGLSDGELRIMVDGYLSHYDEIFRLKGIAAKTDVFHLITGMWTSSAERCFLWMGGFRPSELITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGHEQLQQSLVDTIAGGPIGDGVQQMVIAMSKLSNLEGFVRQADNLRQQTLHQLCRLLTIRQAARCFLVMAEYYARLRALSSLWASRPRETMMNDENSCQTTTTEFQMVQPPPPPHHHQNHFAGF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0427 501 MobiDBLite consensus disorder prediction 158 172 - -
Acco08g0427 501 PANTHER TRANSCRIPTION FACTOR TGA9 144 466 - -
Acco08g0427 501 Gene3D - 191 240 - -
Acco08g0427 501 FunFam BZIP family transcription factor 191 240 - -
Acco08g0427 501 Pfam bZIP transcription factor 191 233 IPR004827 GO:0003700|GO:0006355
Acco08g0427 501 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Acco08g0427 501 MobiDBLite consensus disorder prediction 173 194 - -
Acco08g0427 501 CDD bZIP_HBP1b-like 192 243 - -
Acco08g0427 501 MobiDBLite consensus disorder prediction 482 501 - -
Acco08g0427 501 MobiDBLite consensus disorder prediction 1 26 - -
Acco08g0427 501 Coils Coil 211 238 - -
Acco08g0427 501 MobiDBLite consensus disorder prediction 1 16 - -
Acco08g0427 501 Pfam Seed dormancy control 272 347 IPR025422 GO:0006351|GO:0043565
Acco08g0427 501 SUPERFAMILY Leucine zipper domain 192 235 IPR046347 GO:0003700|GO:0006355
Acco08g0427 501 ProSiteProfiles DOG1 domain profile. 255 463 IPR025422 GO:0006351|GO:0043565
Acco08g0427 501 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 234 IPR004827 GO:0003700|GO:0006355
Acco08g0427 501 MobiDBLite consensus disorder prediction 98 145 - -
Acco08g0427 501 MobiDBLite consensus disorder prediction 98 123 - -
Acco08g0427 501 SMART brlzneu 188 253 IPR004827 GO:0003700|GO:0006355
Acco08g0427 501 MobiDBLite consensus disorder prediction 157 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0427 Acco-ChrAcco08 3378273 3384856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0427 147 501 bZIP Transcription Factor Family AT1G08320 67.416 3.23e-175 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco08g0427 DOG1 4.5e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3661 01 52874012 52879979 Acco08g0427 08 3378273 3384856 CCT