Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0419 ATGGGGTTCCTTCAAGTCTTCATCAGGATCACTCTTTTCCTGTTTATTGGATTCACTTTAGTTCATGGAGTCACTTCTAAGCAAAAGCATTATATAGTATACATGGGAGAGCATTCACATCCCAATTCAGAATCTGTAGTCAGAGCAAACCATGAGATTCTTGCTTCAGTCTCTGCAAGTTTGGACGAAGCAAAAGCAGCAGCAGTTCATCACTACACGAAAAACTTTCGGGGTTTCTCAGCCATGCTCACGCCAGAGCAAGCTGATCAACTTGCAGAACATGATTCAGTAGTGTCAGTGTTTGAGAGCAAAATGAATCGGCTCCATACTACACGTTCATGGCATTTTCTTGGACTGGATTCTGTCTACAATGGGGGTTATCTACCCATGGACTCTACATCCAATGTCATTGTTGGTGTTGTTGACTCAGGGATATGGCCTGAATCAAAAAGCTTCAGTGATGAAGGATTAGGTCCTGTGCCTGAAAAATTCAAGGGAGAGTGTGTCATTGGTGAAAACTTCACAAAAGCCCATTGTAACAAGAAAATAATTGGTGCACGGTTCTATTCCAAAGGTTTCATAACAGATAATGGTCCACTGGAATTTCAGAACAGGACTTTCTTTATGTCAGCTCGAGATAGCGATGGACATGGGACCCACACTGCTTCCACAATTGCAGGATCCATTGTCAGTGACGTTAGCTTTCTTGGAATGGCTAGGGGAACTGCCAGAGGAGGAGCTCCAGGAGCCAGACTTGCCATCTACAAGGCTTGCTGGTTTGGTATGTGCAGTGATGCTGATATTCTTTCTGCCATGGATGATGCTATTCATGATGGTGTTGATATCTTGTCGCTTTCCCTCGGACCGAACCCGCCCCAGCCAATTTATTTCGAGGATGCGGTATCTATAGGAGCATTCCATGGATTTAGAAGGAATGTTCTCATTTCTGCTTCTGTAGGGAACTCAATTTTTCGAGGTACAGCTTGCAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGCACTATAGATAGGGAATTCCATTCAAATATCTTACTTGGCAACTCAAAAGTTTTGAAGGGTTTCTCTTTGAATCCAATTAAAATGAAGAAGTCTTATGGCTTGATAGATGGGAAAAATGCTGCAGCACCTGGCATTCCATCAAGAAATGCAAGCTTCTGCAAAGACAACACTCTAGATCCTACCCTGATCAAGGGGAAAATTGTGGTTTGTACAATTGAGACTGTGGCTGATGATCGACCAGCAAAGGCTACGGCTATAAAGCAAGGTGGGGGTGTTGGAATGATACTTATTGATCACAATGCTAAAGATGTTGGCTTTCAGTTTGTCATCCCAAGCACTATTATTGGTGAGGGAGCTGTTCAAGAGCTACAGGCATACATGAACACAGACAAGAACCCAGGTGCTAGGATCTTGTCAACAATAACTGTCGTAGATGTTAAACCTGCACCAGAAGTTGCGGCGTTTTCTTCTGTGGGACCAAATATAATTACGCCTGACATTATAAAGCCTGACGTCACAGGCCCTGGAGTGAATATTTTAGCAGCATGGTCTCCATTGGCAACTAAAGACACAACCGAACACCGATCCGTTGACTATAACATCATCTCTGGAACATCCATGTCTTGTCCCCACATTACTGCAATTGCTGCAATCTTGAAGTCTCATCAACCCTCATGGGGTCCAGCAGCCATAATGTCTGCAATAATCACAACCGCAACAACCATGGACAACACACGTGGCCTAATTGGAAGAGATCCAAATGGAACTCAAGCCACACCATTTGATTATGGATCAGGCCATATTAACCCAGTCGCAGCACTAAACACAAGACTAGTGTATGATTTTGATTCCCATGATGTTCTGAATTTTCTGTGCAGTGCTGGTGCAAGTCCAGCTCGGCTTAAGAACCTAACTGGGGAACTACTTGTGTGTCAGAAATCTCCTCCTGCGTCCTACAACTTGAATTATCCTTCAATTGGGGTATCAAACTTGAATGGAAGTTTGTCGGTTTATCGGACAGTTACTTACTATGGTATGGAACCAACAGTATATGTAGCAAGTGTTGAGGAACCAGCTGGTTTGAAAGTTAAGGTTACACCTTCAGAAATTGAGTTTAGGAAAGCAGGGGAGAAAGTAACTTTCAGAGTTGATTTGAGTCCTTACAAGAGAAGCAACGGGAATTTTGTGTTTGGGGCCTTGATATGGAAAAATGGGATGCATAGTGTTAGAAGCCCTGTTGCGCTCAAGGGCATTCATGTGATCGTGTCCATGTTTTTAGAAACCAAAGGGATGATTGCAGAGAAACCTAGTTGGGTTAGGCATGAGGGCATGCAAATTTTTTCCATCGATGTACAACCTGGTGGGCTTCGGTTCGCCACTGGCGGTGGCGACCACAAGGGTGCGCCACTAGGTGGTGCCCAGTGGCTTAGTACATCAGTTCGCATATGGAACATGAAATCTGTCAGTAGGGATATGACAAATGATGACTCGTCCCAGAGACTTCTTGCTACCCTGCGAGATCACTTTGGATCTGTCAATTGTGTCCGATGGGCCAAGCATGGAAGGTATGTTGCGTCAGGGTCTGATGATCAGGTGATATTAGTTCATGAGAGAAAGCCTGGTTCAGGAACCACTGAGTTTGGTAGTGGAGAGCCCCCAGATATTGAAAACTGGAAAGTTGCATTGACTTTGAGAGGGCACACTGCAGACGTGGTGGATCTTAATTGGTCTCCTGATGACTCCACATTGGCCAGTGGTAGTTTAGACAATACCATCCATATCTGGAATATGAGCAATGGCATCTGCACTGCTGTTCTCAGGGGACACTCTAGCCTGGTTAAGGGTGTTGCTTGGGATCCCATTGGATCTTTCATAGCAAGTCAATCAGATGATAAAACTGTAATTATTTGGCGAACTACTGATTGGAGTCTTGCTCACAGGACAGATGGTCACTGGGCAAAATCTCTTGGGTCTACCTTTTTTAGGCGGCTTGGATGGTCTCCCTGTGGTCATTTTATCACTACTACACATGGATTCCAGAAGCCAAGGCATTCTGCTCCTGTCCTAGAGAGAGGGGAATGGTCTGCAACATTTGACTTCCTAGGGCATAATGCTCCAGTGATTGTGGTGAAGTTTAACCATTCAATGTTCAGGAGGAATTCTTCTAATGCCCAGGAAGTGAAGCCTGTACCTGTTGGGTGGAGTAATGGTGCTTCCAAGACTGGAAGCAAAGAGCCACAGCCTTACAATGTTATTGCCATTGGAAGTCAGGATAGGACTATAACAGTATGGACTACTGCGAGTCCTCGGCCTCTCTTTGTGGCCAAGCATTTTTTTACCCAAAGTGTTGTTGATTTATCCTGGAGCCCTGATGGATATTCACTTTTTGCATGTTCCTTGGATGGATCTGTTGCCACATTTCATTTTGAGGTCAAAGAACTTGGCCAGAGACTAAGTGATGATGAGCTAGATGAGTTGAAGAAAAGCCGCTATGGTGATGTGAGGGGTCGTCAAGCGAACTTAGCAGAAAGTCCAGCACAGTTATTGCTTGAAGAAGCTTCACTGAAGCAAGCACCCAGCAAAAAAATTGTTTCTGATGTCCAGCAAAACCAGACTATGACTAAAGCTTATGTTGATGAAAGGGCTGCTATAAAAATTGCTGAACCTCAAGTTGATGGTAAAAGGAGTGGAGGTCTTGTTGGTGATGGGATAAACAAAGTTGCAACCTCTGGCCGAATTTCTAGTCCTGTCAAGCAAAGAGAATATAGACGTCCTGATGGCAGAAAAAGAATCATTCCAGAAGCAGTTGGAGTGCCTTCTCAGCAGGAAAACATATCAGGCACAGTTCAGTCTCAATCACTTGATTTTCCTCTCATGTCATCTAACAATGGAGTTGTTTCTGCTGACGATGGTATAAGAGCAAATAATGTAGGAGGACAACTTGTCAGAAGTTCTGATGTAAAGGAGCGTTCTGGAATTACTGCCAGGGCAACAATTTCTGAGAGCTTAGTGATTGAGAAGGTTCCACCACCTGCTGGCGGAGATGGAAGCATTAACGTTGAGCAGTTGGGAAATGTGATGAGTTCTAGTTCTTTAGCTGCTTGTAATGCTACACTTTCTTTAAGGGTTTTTGACAAGAAAGGTGGGGAAGATACTGCACCGATTTGCTTAGAAGCACGCCCTAGAGAACATGCTGTAAATGACATTATGGGCATGGGAAGCACATCCACAATGAGGGAAACAGAAATTGCTTGCACGAGGGGGTCCCAGACACTTTGGTCTGATAGGATATCAGGAAAAGTCACTGTTTTAGCGGGAAATGCTAATTTCTGGGCGGTTGGTTGTGAAGATGGATGTCTGCAGATTTACTCTAAGTGTGGGAGACGATCGATGCCTACCATGATGATGGGATCTGCAGCAACATTTATAGACTGTGATGAGTGTTGGAAATTGTTGTTGGTCACAAGAAAAGGATCCCTTTATTTATGGGATTTATTCAATCGACAGTGCCTCCTGCAGGATTCATTGGCTTCTCTCATCTCTCCCAGTCTCAACTCATCTAGTAAAGACGCAGGTACTATTAAAGTTATATCTGCAAAGCTATCAAGATCTGGTTCTCCCCTTGTTGTTCTGGCCACTCGCCATGCTTTTCTGTTTGACATGGGTCTCAAGTGTTGGCTAAGGGTAGCAGATGACTGCTTTCCTGCATCTAATTTCGCCAGCTCTTGGAGTTTGGGTTCATTTCAAAGTGGTGAGCTTGCAGCTTTGCAAGTTGATGTTAGGAAATATCTGGCTCGAAAGCCTGGTTGGACCAGAGTGACTGACGATGGAGTGCAGACACGTGCTCATTTAGAAGCACAGTTGGCTTCTTCATTGGCTTTAGGATCCCCTAATGAATATCGCCAGTGCCTGTTGTCATATGTGCGCTTTCTAGCAAGAGAAGCAGATGAATCTCGATTGCGAGAAGTATGCGAGAGTTTTCTTGGACCTCCAACTGGTATGGGTGAGGAATCATCTTCAAGGGAAAAAAACTTAGCATGGGATCCTCTTGTACTGGGAATGAAGAAACACAAACTCCTCAGGGAAGATATTCTTCCATCTATGGCATCTAACAGGAAAGTTCAGAGACTGCTCAATGAATTCATGGACCTTTTATCTGAATATGAAATTACTGAAGTTAATCAAGACCATAGAAATTCTGTTATACCGAAGTCGTCTTCTCAGGCAACAAACCAACTAGAATGTGGTTTGAAATCAACCACTCAAATGGACGACAATCAGCCGAAAGTAGGTCGAAGGGATTCTGTTGTTGCAGCCATTGACCTCAATGTCAATGACAATACGATGATTGCTAAAGATCAAAGCAATGCTGATCTGCCGTCGGCTATTGAAATCTGTCCCGATTCCCCCATGATTGATACAGTTAGACAGGATGGGCAAGCAAAAGGTTCTGATTCTTGA 5484 0.4411 MGFLQVFIRITLFLFIGFTLVHGVTSKQKHYIVYMGEHSHPNSESVVRANHEILASVSASLDEAKAAAVHHYTKNFRGFSAMLTPEQADQLAEHDSVVSVFESKMNRLHTTRSWHFLGLDSVYNGGYLPMDSTSNVIVGVVDSGIWPESKSFSDEGLGPVPEKFKGECVIGENFTKAHCNKKIIGARFYSKGFITDNGPLEFQNRTFFMSARDSDGHGTHTASTIAGSIVSDVSFLGMARGTARGGAPGARLAIYKACWFGMCSDADILSAMDDAIHDGVDILSLSLGPNPPQPIYFEDAVSIGAFHGFRRNVLISASVGNSIFRGTACNVAPWILTVAASTIDREFHSNILLGNSKVLKGFSLNPIKMKKSYGLIDGKNAAAPGIPSRNASFCKDNTLDPTLIKGKIVVCTIETVADDRPAKATAIKQGGGVGMILIDHNAKDVGFQFVIPSTIIGEGAVQELQAYMNTDKNPGARILSTITVVDVKPAPEVAAFSSVGPNIITPDIIKPDVTGPGVNILAAWSPLATKDTTEHRSVDYNIISGTSMSCPHITAIAAILKSHQPSWGPAAIMSAIITTATTMDNTRGLIGRDPNGTQATPFDYGSGHINPVAALNTRLVYDFDSHDVLNFLCSAGASPARLKNLTGELLVCQKSPPASYNLNYPSIGVSNLNGSLSVYRTVTYYGMEPTVYVASVEEPAGLKVKVTPSEIEFRKAGEKVTFRVDLSPYKRSNGNFVFGALIWKNGMHSVRSPVALKGIHVIVSMFLETKGMIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKGAPLGGAQWLSTSVRIWNMKSVSRDMTNDDSSQRLLATLRDHFGSVNCVRWAKHGRYVASGSDDQVILVHERKPGSGTTEFGSGEPPDIENWKVALTLRGHTADVVDLNWSPDDSTLASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVAWDPIGSFIASQSDDKTVIIWRTTDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPRHSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMFRRNSSNAQEVKPVPVGWSNGASKTGSKEPQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGSVATFHFEVKELGQRLSDDELDELKKSRYGDVRGRQANLAESPAQLLLEEASLKQAPSKKIVSDVQQNQTMTKAYVDERAAIKIAEPQVDGKRSGGLVGDGINKVATSGRISSPVKQREYRRPDGRKRIIPEAVGVPSQQENISGTVQSQSLDFPLMSSNNGVVSADDGIRANNVGGQLVRSSDVKERSGITARATISESLVIEKVPPPAGGDGSINVEQLGNVMSSSSLAACNATLSLRVFDKKGGEDTAPICLEARPREHAVNDIMGMGSTSTMRETEIACTRGSQTLWSDRISGKVTVLAGNANFWAVGCEDGCLQIYSKCGRRSMPTMMMGSAATFIDCDECWKLLLVTRKGSLYLWDLFNRQCLLQDSLASLISPSLNSSSKDAGTIKVISAKLSRSGSPLVVLATRHAFLFDMGLKCWLRVADDCFPASNFASSWSLGSFQSGELAALQVDVRKYLARKPGWTRVTDDGVQTRAHLEAQLASSLALGSPNEYRQCLLSYVRFLAREADESRLREVCESFLGPPTGMGEESSSREKNLAWDPLVLGMKKHKLLREDILPSMASNRKVQRLLNEFMDLLSEYEITEVNQDHRNSVIPKSSSQATNQLECGLKSTTQMDDNQPKVGRRDSVVAAIDLNVNDNTMIAKDQSNADLPSAIEICPDSPMIDTVRQDGQAKGSDS 1827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0419 1827 CDD WD40 782 1145 - -
Acco08g0419 1827 Gene3D Peptidase S8/S53 domain 135 627 IPR036852 GO:0004252|GO:0006508
Acco08g0419 1827 Pfam Fibronectin type-III domain 661 755 IPR041469 -
Acco08g0419 1827 Pfam WD domain, G-beta repeat 943 978 IPR001680 GO:0005515
Acco08g0419 1827 Pfam WD domain, G-beta repeat 842 875 IPR001680 GO:0005515
Acco08g0419 1827 Pfam WD domain, G-beta repeat 903 937 IPR001680 GO:0005515
Acco08g0419 1827 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 905 941 - -
Acco08g0419 1827 Pfam TUP1-like enhancer of split 1468 1668 IPR011494 GO:0006338|GO:0006355
Acco08g0419 1827 ProSiteProfiles Serine proteases, subtilase domain profile. 113 615 - -
Acco08g0419 1827 SUPERFAMILY WD40 repeat-like 1372 1820 IPR036322 GO:0005515
Acco08g0419 1827 SUPERFAMILY Subtilisin-like 108 617 IPR036852 GO:0004252|GO:0006508
Acco08g0419 1827 PANTHER MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS 772 1733 IPR031120 GO:0005634|GO:0006325|GO:0006351
Acco08g0419 1827 Gene3D - 901 1175 IPR015943 GO:0005515
Acco08g0419 1827 Gene3D - 762 892 IPR015943 GO:0005515
Acco08g0419 1827 FunFam Subtilisin-like protease SBT5.3 21 109 - -
Acco08g0419 1827 SUPERFAMILY WD40 repeat-like 786 1146 IPR036322 GO:0005515
Acco08g0419 1827 CDD Peptidases_S8_3 108 581 IPR034197 -
Acco08g0419 1827 SMART WD40_4 839 878 IPR001680 GO:0005515
Acco08g0419 1827 SMART WD40_4 1109 1149 IPR001680 GO:0005515
Acco08g0419 1827 SMART WD40_4 772 825 IPR001680 GO:0005515
Acco08g0419 1827 SMART WD40_4 1034 1106 IPR001680 GO:0005515
Acco08g0419 1827 SMART WD40_4 940 979 IPR001680 GO:0005515
Acco08g0419 1827 SMART WD40_4 898 937 IPR001680 GO:0005515
Acco08g0419 1827 SMART WD40_4 1428 1465 IPR001680 GO:0005515
Acco08g0419 1827 ProSiteProfiles Trp-Asp (WD) repeats profile. 947 978 IPR001680 GO:0005515
Acco08g0419 1827 Gene3D - 632 759 - -
Acco08g0419 1827 Pfam Subtilase family 134 586 IPR000209 GO:0006508|GO:0008236
Acco08g0419 1827 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 947 978 - -
Acco08g0419 1827 ProSiteProfiles Trp-Asp (WD) repeats profile. 846 876 IPR001680 GO:0005515
Acco08g0419 1827 FunFam Protein HIRA 901 1172 - -
Acco08g0419 1827 Pfam Peptidase inhibitor I9 30 109 IPR010259 -
Acco08g0419 1827 ProSiteProfiles Trp-Asp (WD) repeats profile. 905 946 IPR001680 GO:0005515
Acco08g0419 1827 FunFam Subtilisin-like protease SBT1.5 135 361 - -
Acco08g0419 1827 Gene3D - 344 485 - -
Acco08g0419 1827 ProSitePatterns Trp-Asp (WD) repeats signature. 924 938 IPR019775 -
Acco08g0419 1827 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 109 IPR037045 -
Acco08g0419 1827 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Acco08g0419 1827 CDD PA_subtilisin_like 350 478 - -
Acco08g0419 1827 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Acco08g0419 1827 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Acco08g0419 1827 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0419 Acco-ChrAcco08 3290103 3301687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0419 31 757 Subtilisin-like Serine Gene Family AT2G04160 42.819 1.08e-180 563