Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0408 ATGCAAAATTCATAGAAAGCCGACGAAGGCGCAACTTTTGCTCAGTCTCTCACAGGTCGTCTTTGTAGAACTCAGCCAGAGATGAAGGTGATTGCAGCTTTTTTGTTGGCAGTTTTGGGAGGGAACACATCCCCCTCGGCTGATGATATAAAGTATATTCTTGGCTCAGTTGGGGCTGAGGCTGATGATGAGAGAATTGAGCTTCTCTTAAATGAAGTTGAGGGCAAAGATATTACCGAATTAATTGCTTCTGGAAGAGAAAAGCTGGCTTCAGTTCCATCTGGTGGAGGTGCAGTTGCTGCTGTTGCTGCACCTGCAGGAGGTGCTGCAGCTGGTGGAGCTGCACCTGCTGCAGAGGCAAAGGAGGAAAAGAAGGTGGAAGAGAAAGAGGAGTCCGATGATGACATGGGTTTCAGCTTATTCGACTAA 429 0.4755 MQNSXKADEGATFAQSLTGRLCRTQPEMKVIAAFLLAVLGGNTSPSADDIKYILGSVGAEADDERIELLLNEVEGKDITELIASGREKLASVPSGGGAVAAVAAPAGGAAAGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0408 142 CDD Ribosomal_P2 28 142 IPR044076 GO:0002182|GO:0003735|GO:0022625
Acco08g0408 142 Pfam 60s Acidic ribosomal protein 44 141 - -
Acco08g0408 142 MobiDBLite consensus disorder prediction 118 132 - -
Acco08g0408 142 Gene3D - 27 86 IPR038716 -
Acco08g0408 142 Hamap 50S ribosomal protein L12 [rpl12]. 29 142 IPR027534 GO:0003735|GO:0005840|GO:0006414
Acco08g0408 142 FunFam 60S acidic ribosomal protein P2 25 86 - -
Acco08g0408 142 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 28 142 IPR044076 GO:0002182|GO:0003735|GO:0022625
Acco08g0408 142 MobiDBLite consensus disorder prediction 109 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0408 Acco-ChrAcco08 3193452 3195264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0408 28 142 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 70.435 5.56e-35 115