Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0386 ATGGAGTTCTGGGGTGAGATTCACCTTCATCCTCATTTATTTATTCGGAAATGTTTATGTGTAAATGTTCCATGTGATGCTTCTACTCTTGCGTTGCCCGACGCTGTTTTTCAAGGAGAGTGGAGTGGAGGTGTCATTTATTCGATTATGGTTGAAGGAATTGGAGAGGGAAGAGGCGTTGAGGTCAAGGCTGGGGCACCTGTTGAAGTAGATCCAGAAGAGTTTGATAAATGCATACACCTGTCTCAGGCTGCTCTTGGCGAGGCAAAGAATAAAGCAAGTGAACCTGTGATCCTTTATCTGAAGATTGATGACCAGAAGCTTGTTTTAGGAACCCTTTCCCAGGAGAAATTCCCTCAACTATCTTTTGATTTGGTTCTAGAGAAAAAGTTTCAGCTCTCTCACAATTGGAAAAGTGGAAGTGTTTATTTCTGTGGTTACAAGGCGGAATTACCAGGATATCCTTTGCACTTGTATCAATTTGTTGTGTTGCCAACTAATTTTTGTCGTTAG 513 0.4172 MEFWGEIHLHPHLFIRKCLCVNVPCDASTLALPDAVFQGEWSGGVIYSIMVEGIGEGRGVEVKAGAPVEVDPEEFDKCIHLSQAALGEAKNKASEPVILYLKIDDQKLVLGTLSQEKFPQLSFDLVLEKKFQLSHNWKSGSVYFCGYKAELPGYPLHLYQFVVLPTNFCR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0386 170 Gene3D Nucleoplasmin core domain 54 151 - -
Acco08g0386 170 FunFam Histone deacetylase HDT1 56 153 - -
Acco08g0386 170 Pfam Nucleoplasmin-like domain 59 147 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0386 Acco-ChrAcco08 3010803 3011862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0386 59 150 C2H2 Transcription Factor Family AT5G03740 56.522 9.02e-32 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3694 01 53154923 53160093 Acco08g0386 08 3010803 3011862 CCT