Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0385 ATGGATGAGAACATGTCTGACAGTGACGATGAGGAGGCTATACCATTGACGATCAAAGATAATGCTAAACCTGATATAACGCCTGAAGTAGGAAAGGCTGCTGCATCTAAAAGTAAAGATGACAAGCCTGCTGATTCAAAAAAGCAAGTCAAGGTTGTGGATCCAATGAAAGATGAAGAGGATGATTCATCAGATGGTGAAGAGGATGATGAATCTGATGAATCAGATGATGATGACGATGACAGTCCTGATGAGGTTATGTTGGGTGGTGTTGGTGATAGTAGTGATGAGAGTAGCGAAGATGATGATGAAACCCCTCCTAAGAAGGTTGATCATGCTAAGAAGAGACCAAATGAATCTGCCCTGAAAACTCCTGTTCCTTCCAAAAAGGCAAAATCTGCTACCCCTCAAAAGACCGATGGTAAGAAAAGTGTCCATGTAGCAACTCCTTATCCACATAAGAAAGATGGAAAGTTTCCTAAAGGTGACCAAACTCCCAAATCCTGGGGACAGTTTACGTGCAAATCTTGTAGCAAGACTTTTAACTCAGAAGGGGGCCTGCAACAACATTCAAAGGCTAAGCATGGGGGTCCGTGA 597 0.4288 MDENMSDSDDEEAIPLTIKDNAKPDITPEVGKAAASKSKDDKPADSKKQVKVVDPMKDEEDDSSDGEEDDESDESDDDDDDSPDEVMLGGVGDSSDESSEDDDETPPKKVDHAKKRPNESALKTPVPSKKAKSATPQKTDGKKSVHVATPYPHKKDGKFPKGDQTPKSWGQFTCKSCSKTFNSEGGLQQHSKAKHGGP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0385 198 SUPERFAMILY beta-beta-alpha zinc fingers 163 194 IPR036236 -
Acco08g0385 198 SMART c2h2final6 172 195 IPR013087 -
Acco08g0385 198 MobiDBLite consensus disorder prediction 34 58 - -
Acco08g0385 198 Gene3D Classic Zinc Finger 170 196 - -
Acco08g0385 198 MobiDBLite consensus disorder prediction 1 198 - -
Acco08g0385 198 MobiDBLite consensus disorder prediction 102 119 - -
Acco08g0385 198 ProSitePatterns Zinc finger C2H2 type domain signature. 174 195 IPR013087 -
Acco08g0385 198 ProSiteProfiles Zinc finger C2H2 type domain profile. 172 198 IPR013087 -
Acco08g0385 198 MobiDBLite consensus disorder prediction 59 86 - -
Acco08g0385 198 MobiDBLite consensus disorder prediction 147 162 - -
Acco08g0385 198 MobiDBLite consensus disorder prediction 166 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0385 Acco-ChrAcco08 3008469 3010663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0385 117 195 C2H2 Transcription Factor Family AT5G03740 57.303 5.03e-21 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco08g0385 None None None