Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0371 ATGGCGGAGGATCGGAACGGCGATAGCAATAAGTTAAGTGATTGTAGTTCGGAGGACGAAGGGAGTGAGGACTACAAACGAGGAGGTTATCATGCCGTTCGAATTGGTGACACTTTAAAAAATGGGTGCTATGTGGTGCAAAGCAAACTCGGCTGGGGTCATTTTTCTACTGTGTGGCTCGCTTGGGATACCCAGAGATCGCGTTATGTAGCCCTAAAAATTCAGAAGAGTGCCCAGCACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAGATTGCTGAAGGGGACCCGGATGACAAGAAATTTGTTGTCAAGCTTTTAGATCACTTTAAGCATTCAGGACCCAATGGCCAGCATGTGTGTTTGGTTTTCGAATTCTTGGGTGACAATCTTCTGACCCTTATAAAGTATAGCGACTACCGAGGGATTCCTATCTCAATGGTTAAAGAAATTTGTTTTCATATTCTGGTGGGGTTGGATTACTTGCATCAGGAGCTATCTATAATACACACAGATTTGAAGCCAGAGAATGTCTTGCTTTTGTCAACGATGGATCCATCCAAAGATCCTAGAAAATCTGGTGCCCCACTTATCCTTCCAAATACCAAGGATAAGAACATTTCAAAAGTTGGCGCCACAAAAGACAGTAATTATTCTAAAGGGGATCTGACCAGGAACCAGAAAAAGAAATTGCGGAAAAAGGCTAAAAAGGCAGCTCAAAGTTGTGTTGAGAAGGAGATTCCCAAGGAAGACGAGGAGGATTCTAAATCACCTGAAGTAAAAGATTGTGGTGATGATGTGAAAAAGATTGTGGAATCTGATGATAAACCTAGTAGTCTTGTAACCAAAGATGAACCAATTGAAGTTGTTGAAACCGAGGATATCCCAAAAGGTGGTCATGGTCAACTGAGAGTTAGTCGTTCCATGAAAAAGAAGTTGCTTGCTGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGAAATGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTATTCTCGGATGCAAATATTCAACTCCAGCTGATCTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTTCCACTGGAGATGTTCTTTTTGATCCGCACAGTGAAGACAACTATTCAAGGGATGAGGATCATTTGGCATTGATGATGGAACTTCTTGGATCGATGCCTCAGAAGATTGCTCTAGGAGGTCGCTATTCTCGAGAGTTTTTTAACAGAAATGGTGATTTAAGGCACATCCGCCGGTTACGTTTCTGGCCTGTTAACAAGGTGCTGATGGAGAAGTACAATTTTAGTGAGCAAGATGCAAATGACATGGCCGACTTCCTTGTTCCACTACTTGATTTTGCCCCCGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAATCATCCATGGATCTCTGCAGGTCCTCGGACTCTCCAGCCTTCAGTGACTACTGTTCAATCTGAGGCCACAGACAAGGTAATGTCTGAAAAGATGAAGGAAAAGGCTGAGTTGGAGGCAGTTGAAGTTGGTGTGCGGAATATAACCATTGATGGATCTCCAAAGGCACTCACAGATTCACAGGCTACACATAGTTAG 1635 0.4281 MAEDRNGDSNKLSDCSSEDEGSEDYKRGGYHAVRIGDTLKNGCYVVQSKLGWGHFSTVWLAWDTQRSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDKKFVVKLLDHFKHSGPNGQHVCLVFEFLGDNLLTLIKYSDYRGIPISMVKEICFHILVGLDYLHQELSIIHTDLKPENVLLLSTMDPSKDPRKSGAPLILPNTKDKNISKVGATKDSNYSKGDLTRNQKKKLRKKAKKAAQSCVEKEIPKEDEEDSKSPEVKDCGDDVKKIVESDDKPSSLVTKDEPIEVVETEDIPKGGHGQLRVSRSMKKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGCKYSTPADLWSFACICFELSTGDVLFDPHSEDNYSRDEDHLALMMELLGSMPQKIALGGRYSREFFNRNGDLRHIRRLRFWPVNKVLMEKYNFSEQDANDMADFLVPLLDFAPEKRPTAAQCLNHPWISAGPRTLQPSVTTVQSEATDKVMSEKMKEKAELEAVEVGVRNITIDGSPKALTDSQATHS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0371 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Acco08g0371 544 FunFam Serine/threonine-protein kinase SRPK-like protein 314 484 - -
Acco08g0371 544 ProSiteProfiles Protein kinase domain profile. 44 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0371 544 SUPERFAMILY Protein kinase-like (PK-like) 39 495 IPR011009 -
Acco08g0371 544 SMART serkin_6 44 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0371 544 MobiDBLite consensus disorder prediction 240 268 - -
Acco08g0371 544 FunFam CMGC/SRPK protein kinase 30 129 - -
Acco08g0371 544 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Acco08g0371 544 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Acco08g0371 544 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 13 503 - -
Acco08g0371 544 MobiDBLite consensus disorder prediction 1 24 - -
Acco08g0371 544 Gene3D Transferase(Phosphotransferase) domain 1 127 485 - -
Acco08g0371 544 CDD STKc_SRPK 33 484 - -
Acco08g0371 544 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0371 544 Pfam Protein kinase domain 320 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0371 544 MobiDBLite consensus disorder prediction 186 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0371 Acco-ChrAcco08 2899716 2903179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0371 1 544 EF-hand Containing Proteins AT5G22840 64.973 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Acco08g0371 Pkinase 6.7e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g3707 01 53255010 53257445 Acco08g0371 08 2899716 2903179 CCT