Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0356 ATGGCGAACGGTAAGGATTCTGACGAGTTCCTGGTGTTGTCGAAGGTCCGGACGGGTCTGAAGAGGGAGTTTGCATTCGCCATGAAGGCTCAATCCGAGATCTGTGGATCTCTGGGACGGACTCGTGCTAGCAAATTCAAGAATGGGGTTCAAGAAACTCCCAGCAACAAGAGGTCCAAGAAATCTGGCTCATCTAGGGCTAAGAGAGATGAGCCGAATGGTGCGAAGCCTGTGCCGGAGGATGTTGCCGAACCCATTGTTTTGGAAGAGGTCAAAGGGAAGGAGGTAAAGGCTGTGCAGGATATGGAGGATGTTATGAGCGAGGAGGAGGCGAAAAGCGATGTGGTGGATTTATCGGGTGACGACGAACCCAAGAACCCAGTGGGTGAGTCGATGGGCTCGAGGGAACCCGTGGATTGTGATGAGGAGCCCAAGGGCGATGACGTAGAAACTGTAAGCGACGATGAGCCGAAAAGTATTCCAACTTCAGAATCATTGAAGGAAGCGACAATGGAAGATATAGCGCAACCCATTTGCCAACCCGAGTCCAAGGAACATCAAACAAATGAAGACGATGTACAGAAGTCCTTAACGACTGAGAACTTGATTGGGGGAGAGAAATGTTCTCCAGATGAAAAGGATGTTATTGTGACTACTCCTGTTTCGCTTAATGATGACAATAAGGTGAAGGCAATGGTAGGGGGTCCAGGGAGGCGGTTTACGCGGTCGGTTCTGAGACAACAGCAAGATGATTCAAAGCTCTCAAATGATGGAAAAGAAGGTTGTGATACAGCCATTGGACTTGGTGATGTTAGGAGGGAAAGTGAAGATGCTTCATTAATCCCTACGCCTCAAACAAAAAGGCTGAAGAATAGTGCCTCGAAGAAGTTCTCTTCCTCGAAGAAGTTCCCTTCGAAGCTCAAGGACCTTCTAACCACGGGGATTCTTGAAGGGCTGCCTGTACATTATGTTCGGGGAGTGAAGACACGAAGGCCTGGAGAAACAGGTCTCCGAGGAGAGATTAGAAGCTCTGGGATTTTGTGCTATTGCGAAGATTGTAACGGGGTTGAGGTTGTATCACCCACTGTGTTTGAGCTGCACGCTGGTAGTGCAAACAAGCGCCCCCCAGAGTACATATACCTTGAGAATGGGAATACGCTCCGTGATGTCATGAATACATGTTCGAGCGTTGGAATGGATGTTTTGGAGGAATCAGTGCAGAAAATCCTCGGGGACTTCACCTTTAAGAAATCTGCTACCTGTTTGAATTGCAGAGCGGCCATATCTCAAGCTGGCAAGGGATGGTCGAGACTACTCTGTGATACATGCGTGGTCTTTAAAGATTCTCAGCCTAGCCCTGTTCAAATAGCTGAGGCTAGCAATTCCTGTTCTTCACCTGTAGTTACTCTCAGGTATCTTCTCGTTTATTTCGTAGTTAACATGTCTCCTGAACCAGTAGTCGTTCCATCAACATTAAATAGTGGGATGAAGCATTCCAACTATTCTAAGTCTTCAGAACCAGTGGTTGTTCCATCAACATTAAACAGTGGGATGAAGCATTCCAACTATTCTAAGTCTTCAGAACCAGTGGTTGTTCCATCAACATTAAACAGTGGGATGAAGCATTCCAACTATTCGAAGTCTTTAGAACCAGTGGTTGTTCCATCAACTTTAAACTGTGGGATGAAGCACACAACATCTCGTGGCAAGAGTCAAGGAAGAATAACTAAAAAGGATCTCCGATTGCATAAATTGGTTTTTGAGGAAGATGTGTTGCCTGATGGAACTGAAGTTGCCTACTATGCTCGTGGACAGAAACTGTTGGTGGGTTACAAAAAGGGTTTTGGAATTATTTGTAGCTGTTGTGACTGTGAGGTGAGCCCCTCACAATTTGAAGTTCATGCTGGTTGGGCATCACGACGCAAGCCTTATCTGCACATATACACATCCAATGGTGTCTCTCTCCACGAATTGTCCATTTCTCTATCAAGAGGTCGGAGGTTTTCTACAAATGAAAATGATGATCTCTGCAGCATCTGCTCAGATGGAGGGAATCTTTTGTGTTGTGATGGATGTCCAAGGGCTTTTCACATAGACTGTGTTCCTCTGTCATGTATTCCAACTGGAACTTGGTATTGTAAATATTGCCAGAACGTCTTCCAGAAAGACAAATATGTGGAGCATAACATGAATGCATTGGCAGCAGGAAGGATTGCTGGGGTTGATCCTTTAGAACAGATAAGTCAAAGATGTATACGCATAGTCAAAACTGTAGAGGTTGACCATGGTGGATGTACATTATGCAGAAGCCATGATTTCAGCAAAATCTTTGGTCCTCGAACAGTGATTATATGTGATCAGTGTGAAAGGGAATATCATGTAGGCTGTTTGAAGGAGCATAACATGCAGAACTTAGAGGAATTGCCTGAAGGAAATTGGTTCTGCTGCACTGATTGCAGTGGGATTCATTCTGCTCTGCTTAATATGGTCTCTTGCGGGGCAGAGAATCTTCCAGATTCTCTATTAAGTATGATACAAAAGAAGCATGAAGAAAAGGGCCTGGAAAATGGGCATGGTTTAGATGTAAAATGGAGAATCTTAAATTGGAAACTGGCTGCCTCTGATGAAACAAGGCAGCTGCTTTCAAAGGCTGTTGCAATCTTCCACGAGCGGTTTGATCCAATAGTTGATTCAAGTTCAGGCCGTGATTTCATTCCAACAATGCTTTATGGAAGGAACATTAGGGGTCAAGATTTTGGTGGGATGTATTGTGCGGTGCTAACAGTGAATGAAGTGGTTGTTTCTGCAGGCGTATTTCGTATATTTGGGGCAGAGGTGGCAGAGCTTCCATTAGTGGCAACAGTTGCAGATTACCAAGGAAAGGGTTACTTCCAGTCCCTGTTTTCTTGCATCGAAGGGCTGCTTGGATCTTTAAATGTGAAACATTTCGTCCTACCAGCTGCTGAAGAAGCGGAATCAATATGGACGAGTAAATTTGGTTTTACCAAGTTGGAACAAGACAAGGTGAACAATTATAAGACATTTTTTCACATGATGATATTTCAAGGGACCTCATTGCTGTGGAAGTCAGTTCCTGCTCCACCAGGGAAGTCAGTTCCTGCTCCACCAGAATTGTGCGTCAATGCGGTGGGAGGGGGCCTATCTTTTTGGGTGTACAGTTCAACAGGCATATACACCTCTAGCTGTAATGATATTTTTTGTAGCCCAGAATTGGAGGAGTATAGAATTGAGATAGAGGAAACTAGAACATTGCATTTTCAAATTGAATAG 3291 0.4476 MANGKDSDEFLVLSKVRTGLKREFAFAMKAQSEICGSLGRTRASKFKNGVQETPSNKRSKKSGSSRAKRDEPNGAKPVPEDVAEPIVLEEVKGKEVKAVQDMEDVMSEEEAKSDVVDLSGDDEPKNPVGESMGSREPVDCDEEPKGDDVETVSDDEPKSIPTSESLKEATMEDIAQPICQPESKEHQTNEDDVQKSLTTENLIGGEKCSPDEKDVIVTTPVSLNDDNKVKAMVGGPGRRFTRSVLRQQQDDSKLSNDGKEGCDTAIGLGDVRRESEDASLIPTPQTKRLKNSASKKFSSSKKFPSKLKDLLTTGILEGLPVHYVRGVKTRRPGETGLRGEIRSSGILCYCEDCNGVEVVSPTVFELHAGSANKRPPEYIYLENGNTLRDVMNTCSSVGMDVLEESVQKILGDFTFKKSATCLNCRAAISQAGKGWSRLLCDTCVVFKDSQPSPVQIAEASNSCSSPVVTLRYLLVYFVVNMSPEPVVVPSTLNSGMKHSNYSKSSEPVVVPSTLNSGMKHSNYSKSSEPVVVPSTLNSGMKHSNYSKSLEPVVVPSTLNCGMKHTTSRGKSQGRITKKDLRLHKLVFEEDVLPDGTEVAYYARGQKLLVGYKKGFGIICSCCDCEVSPSQFEVHAGWASRRKPYLHIYTSNGVSLHELSISLSRGRRFSTNENDDLCSICSDGGNLLCCDGCPRAFHIDCVPLSCIPTGTWYCKYCQNVFQKDKYVEHNMNALAAGRIAGVDPLEQISQRCIRIVKTVEVDHGGCTLCRSHDFSKIFGPRTVIICDQCEREYHVGCLKEHNMQNLEELPEGNWFCCTDCSGIHSALLNMVSCGAENLPDSLLSMIQKKHEEKGLENGHGLDVKWRILNWKLAASDETRQLLSKAVAIFHERFDPIVDSSSGRDFIPTMLYGRNIRGQDFGGMYCAVLTVNEVVVSAGVFRIFGAEVAELPLVATVADYQGKGYFQSLFSCIEGLLGSLNVKHFVLPAAEEAESIWTSKFGFTKLEQDKVNNYKTFFHMMIFQGTSLLWKSVPAPPGKSVPAPPELCVNAVGGGLSFWVYSSTGIYTSSCNDIFCSPELEEYRIEIEETRTLHFQIE 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0356 1096 PANTHER AUTOIMMUNE REGULATOR 72 1030 - -
Acco08g0356 1096 SMART PHD_3 764 820 IPR001965 -
Acco08g0356 1096 SMART PHD_3 676 717 IPR001965 -
Acco08g0356 1096 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 664 742 IPR013083 -
Acco08g0356 1096 FunFam PHD finger family protein 861 1030 - -
Acco08g0356 1096 MobiDBLite consensus disorder prediction 64 124 - -
Acco08g0356 1096 ProSiteProfiles Zinc finger PHD-type profile. 674 719 IPR019787 -
Acco08g0356 1096 Pfam Tify domain binding domain 339 394 IPR032308 -
Acco08g0356 1096 Pfam Tify domain binding domain 610 658 IPR032308 -
Acco08g0356 1096 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 920 1008 IPR016181 -
Acco08g0356 1096 SUPERFAMILY FYVE/PHD zinc finger 756 817 IPR011011 -
Acco08g0356 1096 MobiDBLite consensus disorder prediction 37 170 - -
Acco08g0356 1096 SUPERFAMILY FYVE/PHD zinc finger 665 718 IPR011011 -
Acco08g0356 1096 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 759 821 IPR013083 -
Acco08g0356 1096 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 663 740 - -
Acco08g0356 1096 Gene3D - 862 1029 - -
Acco08g0356 1096 MobiDBLite consensus disorder prediction 44 60 - -
Acco08g0356 1096 CDD PHD1_AIRE 676 716 - -
Acco08g0356 1096 ProSitePatterns Zinc finger PHD-type signature. 677 716 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0356 Acco-ChrAcco08 2785979 2792012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0356 304 1031 PHD Transcription Factor Family AT2G36720 46.332 0.0 652