Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0334 ATGCAGAGATCTGGTTATGGCCGGGATGGAATTTACAGGTCTCTCAGGCCCACTCCAGCCATTCCGAGGGACGATAGTCTCTCTCTCGTTTCATTTCTCTTCAGAAATGTTGCCTCTTTTCCCACCAAACCTGCCTTGTTTGACGCTGATTCCTCCCAATCTTTATCCTTCGCTCAGCTCAAGTCCTTGGTAGTGAAAGTCTCCCATGGCTTCCGACTTCTGGGCATCAACAAAAACGACGTCGTCCTCTTGTTTGCTCCCAACACCATCCTATACCCTGTCTGCTTCCTCGGCGTTACCGCCATTGGCGCCATAGCCTCCACCGCCAACCCTATGTACACAGTGGCGGAGATTTCCAAGCAGGTGAAAGATTCCAATCCCAAGCTCGTGATTACCGTTCCTGAACTGTGGGACAAAGTGAAGGGTTTCAATCTCCCCTCGCTGATTTTGGGTCCCCGAATCCCTTCCCCTGTCGCGCCGAATTCGAAGATTACGACCTTCGATGAATTGCTTGAAATTGCAGGGTCACCAACGGAATTTCCGGGGAGTAATGTCAAACAGGGCGATACGGCGGCGCTTTTGTATTCCTCCGGTACCACCGGGGTTAGTAAGGGAGTGATTCTCACGCATAAGAATTTCATAGCCGCCTCTCTTATGATTGGCATGGACGACGAGTTGGCTAACGAGAGACACGATATCTTTCTTTGCGTTCTCCCGATGTTTCATATTTTCGGGCTTGCAGTCATTACGTACGCGCAGCTTCAGAGGGGCAATGCCGTCGTGTCTATGAAGAAATTTGACTTCGAAATGATGTTAAAGGCCGTTGAAAAGTATAGCGTGACTCGTATGTGGGTTGTGCCTCCAATTATCTTGGCTTTGGCAAAGCAGAGCGTGGTGAAGAAGTATAATCTTTCGTCATTGAAGCAAATTGGTTCCGGAGCTGCTCCTCTGGGGAAAGAATTGATGGAAGAGTGTGCTAAAAAGTTCCCTCAAGCTTTGGTTTTGCAGGGCTATGGTATGACAGAAACTTGCGGCATTGTATCTGTGGAGAATCCAAGGATGGATATTCGTCATAGTGGTTCAGCAGGAATGCTCGTTTCAGGAGTTGAGGCTCAAATAATGAGTTTGGATACACTGAAGCCCCTCCCACCTCGTCAGTTGGGTGAGATATGGGTACGGGGTCTTAATATGATGCGAGGTTATTACAACAATCGACAGGCCACCAGGTTAACTATCGATAAAATGGGATGGGTTCATACAGGAGATATTGGATATTTTGATGAGGAAGGGCAACTTTATGTTGTTGACCGTATCAAAGAACTCATCAAGTATAAAGGATTTCAGGTTGCACCAGCAGAACTTGAAGGATTGCTTGTTTCTCACCCTGAGATAATGGATGCTGTTGTCATCCCATATCCTGATGCGGAGGCTGGTGAGGTCCCAGTTGCCTATGTTGTTCGTTCGCCCAATAGTTCACTGACTGAAGAAGACGTTCAGAAGTTTATTGCTGATCAGGTTGCTCCTTACAAAAGATTACGAAGGGTGACATTCATAAACGCTGTTCCTAAGACAGCTTCTGGGAAAATTCTAAGAAGAGTGCTGATTGAGAAAGCACGCTCCAAGATGTGA 1629 0.4727 MQRSGYGRDGIYRSLRPTPAIPRDDSLSLVSFLFRNVASFPTKPALFDADSSQSLSFAQLKSLVVKVSHGFRLLGINKNDVVLLFAPNTILYPVCFLGVTAIGAIASTANPMYTVAEISKQVKDSNPKLVITVPELWDKVKGFNLPSLILGPRIPSPVAPNSKITTFDELLEIAGSPTEFPGSNVKQGDTAALLYSSGTTGVSKGVILTHKNFIAASLMIGMDDELANERHDIFLCVLPMFHIFGLAVITYAQLQRGNAVVSMKKFDFEMMLKAVEKYSVTRMWVVPPIILALAKQSVVKKYNLSSLKQIGSGAAPLGKELMEECAKKFPQALVLQGYGMTETCGIVSVENPRMDIRHSGSAGMLVSGVEAQIMSLDTLKPLPPRQLGEIWVRGLNMMRGYYNNRQATRLTIDKMGWVHTGDIGYFDEEGQLYVVDRIKELIKYKGFQVAPAELEGLLVSHPEIMDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEEDVQKFIADQVAPYKRLRRVTFINAVPKTASGKILRRVLIEKARSKM 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0334 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 439 - -
Acco08g0334 542 Gene3D - 440 541 IPR045851 -
Acco08g0334 542 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Acco08g0334 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 537 - -
Acco08g0334 542 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Acco08g0334 542 SUPERFAMILY Acetyl-CoA synthetase-like 21 540 - -
Acco08g0334 542 Gene3D - 10 439 IPR042099 -
Acco08g0334 542 Pfam AMP-binding enzyme 34 444 IPR000873 -
Acco08g0334 542 CDD 4CL 21 534 - -
Acco08g0334 542 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0334 Acco-ChrAcco08 2622105 2625481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0334 1 542 Monolignol Biosynthesis Gene Families AT4G05160 68.015 0.0 795