Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0313 ATGAGCATCAGAAGGCCTGAACCGCATGTAGCGCAACAAATTCGGCGTGACAGGATGAGAATAATCCAGAACACCTCCCAGCAGTTACAAGATTTCCCAAGCAATCTTGAACAATTACCTTTACGTCCTGGGACCACTTCTGATCTTCTTCAAGTTAGGAGTGTGAGTAATGCCAATATGCTCTACGAACCTGCTTTTAATTCATCGGATATGGTCAATTTCTCAACGGCTTCGAATCCCTTAGCTGAATCCAGCAGGCTGATGACGATGCCTCAGTTCGCTTCGTCCAGCTTTCATTCTTCTCTCCAAGAGCAATGCGAACTACGTAACTTAGGCCATTGGAGAAACAGTGGGTCACACCAATTATGTGATTGGATGCCTAATTATGCCTCTAGTTCGGGGACTAACGAAAGCAATCCTAATCCTAATTCCATTTTTGGCGTGGAAATCAATAATGAACTCACTGGTGTACAATCGTCTTCTCTGAACAATCCGAACGTTATTATGCAGGATATAATCAAATCAGCTTCATTCAGTGGGCAAGGGTCAGAAATGACGCAACAAACTGACCATGGAATGTGGGTGGGCAACGGAAATCAACTCTTTTTCGTTCCAAACTATGGAATCCAATCAAATCAGTTGCGTCTTGGAAATCCTAATTCTTGCACTAATCGAATGATCCACAGTGATGAATTGGCGGGTCATCCATTGAGCGACTCCAATAATCAGGGCTTATCTTTATCACTGTCGTCGAATTCACAATGCTCAAAACCTTTGAGATCTGTTTCAAATCACTCTTCCAATGCCGGTGACCGTACTGATTATCGAAATGTGGGGCCTCTGGGCCCTTTCACGGGGTATGCTACCATATTGAAGAATTCGAATTTCTTAAAGCCAGCGCAAGAGTTGTTAGAAGAAATCTGTGGTCAACGCAATGAAAAACTTACGAAAGGGCCTGATTTTTCTGGAGGAGTTGGTGCTTCCACTTCTGCTGACGTGGCAAATGCAACAATTGAAAGTGGTATTAACACGAAGAATAGTAGTTCTGGTGCTTCTTCGTTCTCCAGGCTTCAGTGTTCTAATGGAAATGAAAATAGTGGTGGTGGTGGTGGTGGTGGTGGAAACAGGAGTAGCTCTCGCCCTTCTTCTCGGCCAGAGTATCAACAAAGAATGGCTAAGTTCCTGTACATGCAAGAGGAGGTTATCAGAAGATACAGTCAGCATCAGCAACAAATGCAAATGGTTATTCCATCCTTTGAGTCAGTTGCAGGTCTTAGTTCTGCTACTCCTTACATCTCCAAGGCTCTCAAGTCAATATCAAGACACTTCAGATGCCTAGAAAATGCCATCTCCGATCAAGTTAAGCATATAAGAGGAGTTTTGGGAGAGGAATTATCAGCAACTACCAGTGGTGGTGCTTCACCCACCAGTGACAAACATGACATCAGCAACATTGCGCGACAGAAGTTCTTGGACCAAAGCTTTCAAAAGAACAAATTCATTGCTAGTGGTACTGGCTATGTTGAACACCAACAGCTTGCCTGGAGGCCACAGCAGAAAGGCTTGCCTGAGCGTGCGGTGTCAGTTCTTAGAGCTTGGTTGTTTGATCATTTTCTTCACCCGTACCCCACGGACGCTGATAAACACATGCTAGCGGCTCGAACAGGTCTAACTCGGAACCAGGTATCAAACTGGTTCATAAACGCACGAGTACGGGTTTGGAAGCCAATGGTAGAGGAAATACACATGCTTGAGATGAAAGGATTGACGATTGAGAAAGACACCCAAAACGCTGGTAGAAGCGAGGGACCTTGTGCCATTGAAGGCGGCCACCAGGCAAGAGGGGATCAACCTCTGAGAAGCAATCAATTGCCGTGTGTAGAAAGCTGTGTGGATGAGGAGACGGTGGCGGAATTAAACGCACAACAATGGAACCAAGAGAAGCGATCGAAGCTTGGATGTCACGTTACGCCCACCATGGATGGCACGTTAACGGGTTTTGTTCCTTACAGAAGGGCTGAGGTAGAGGTTGGGGGAGCCGGACCTGTGTCATTAACGCTGGCTCTCAAACACGGTGACGTTGAAGCAATACAGCAACACCACCACCAGCTCAGCCGCCATTTTGGAGGGCACGTCATCAATGATTTTGTTGGCCAATAA 2160 0.4588 MSIRRPEPHVAQQIRRDRMRIIQNTSQQLQDFPSNLEQLPLRPGTTSDLLQVRSVSNANMLYEPAFNSSDMVNFSTASNPLAESSRLMTMPQFASSSFHSSLQEQCELRNLGHWRNSGSHQLCDWMPNYASSSGTNESNPNPNSIFGVEINNELTGVQSSSLNNPNVIMQDIIKSASFSGQGSEMTQQTDHGMWVGNGNQLFFVPNYGIQSNQLRLGNPNSCTNRMIHSDELAGHPLSDSNNQGLSLSLSSNSQCSKPLRSVSNHSSNAGDRTDYRNVGPLGPFTGYATILKNSNFLKPAQELLEEICGQRNEKLTKGPDFSGGVGASTSADVANATIESGINTKNSSSGASSFSRLQCSNGNENSGGGGGGGGNRSSSRPSSRPEYQQRMAKFLYMQEEVIRRYSQHQQQMQMVIPSFESVAGLSSATPYISKALKSISRHFRCLENAISDQVKHIRGVLGEELSATTSGGASPTSDKHDISNIARQKFLDQSFQKNKFIASGTGYVEHQQLAWRPQQKGLPERAVSVLRAWLFDHFLHPYPTDADKHMLAARTGLTRNQVSNWFINARVRVWKPMVEEIHMLEMKGLTIEKDTQNAGRSEGPCAIEGGHQARGDQPLRSNQLPCVESCVDEETVAELNAQQWNQEKRSKLGCHVTPTMDGTLTGFVPYRRAEVEVGGAGPVSLTLALKHGDVEAIQQHHHQLSRHFGGHVINDFVGQ 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0313 719 MobiDBLite consensus disorder prediction 233 278 - -
Acco08g0313 719 Gene3D - 519 581 - -
Acco08g0313 719 Pfam Associated with HOX 290 451 IPR006563 -
Acco08g0313 719 ProSiteProfiles 'Homeobox' domain profile. 535 576 IPR001356 GO:0003677
Acco08g0313 719 MobiDBLite consensus disorder prediction 341 387 - -
Acco08g0313 719 Pfam Homeobox KN domain 533 572 IPR008422 GO:0003677|GO:0006355
Acco08g0313 719 SMART prehox3 285 452 IPR006563 -
Acco08g0313 719 MobiDBLite consensus disorder prediction 235 273 - -
Acco08g0313 719 SMART HOX_1 516 580 IPR001356 GO:0003677
Acco08g0313 719 CDD homeodomain 522 577 IPR001356 GO:0003677
Acco08g0313 719 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 193 594 - -
Acco08g0313 719 SUPERFAMILY Homeodomain-like 522 583 IPR009057 -
Acco08g0313 719 MobiDBLite consensus disorder prediction 341 386 - -
Acco08g0313 719 FunFam BEL1-like homeodomain protein 9 519 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0313 Acco-ChrAcco08 2434016 2437665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0313 382 691 Homeobox Transcription Factor Family AT4G34610 42.492 7.68e-62 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Acco08g0313 POX 2.9e-35 No_clan