Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0304 ATGCTTCATGACTCAATTACCAGAGCATTCACAGCTAACCCCAAGAGAAAAGAAAAATCTAATCTTGACATTATGATTTATCCCTGGTTCATTGCCTTACTATGCATTATTAGTTCAAGTTCTGCTCATCAATTCTACGACTCTACAAATTGTTCCACGGATCCTGACACATTCCCAGGTTCGAGGTACACTTGTAAAACTCCCCAAGATCCATGCCAAACATACTTAGTGTTCAGATCGAACCAACGTTTTCAGAAGATTTCAGAGATCTCAAAGCTCTTCCACAAGAACCCTTACAAATTGCTTCAAGAAAATAACCACCTCAACCTCAATTCTTCTTCTCAGTTCATTGAAACAGGCAAAGAGGTTCTTATTCCTGTCACTTGTACTTGCTCTGGCGGTTTCTATCAAGTCAGTTCTAGATATGTAGTCCCAGAAAATACAACATTTTCAGAGATTGCCTGTGGGGTTTATGAAGGGCTTCTCAAATCTTCCACGCTCGAACAGGACAACCTTAACACGACCAGAGCTGGTGATGAGCTTAATGTTCCTCTTAGATGCGCATGTCCTGATAATTCCACTTCTATTGGCAAGAAGTTGAAGTACCTTATAACATACCCTATAATACTTGAAGATTCAGATAGTTACATAAGTGCAAAATTTGGCATCTCAGAAGAAGATTTCCGTGAAGTCAATGACTTGCATCCATTTTCAACTCTTTTCGAACAAACAACTGTTTTGATCCCATTGAGAGATGGTACAATCAAGATTAGTGATATTCCAGAGTCGTCTCCAGCTCCAACCTCTGGTTTTCTGCCAACACTTCCAGTGGCAAAAACACGGAAAAATCGAACCAGTTTGTACATAGCAAGTTCTGTCATAGGATCTTTGATGCTAATCATGGCAATTCTTGTGGGTGTATTGTATTTTAAGGCCTTACGGAAATGGAAGAGCGAAAGTGTTCGACCCTTAACTCCTTCAACCTCCGTCGTCATGTCACCGATGAGAGGCTCTTCAACAACTTCATGTCTTTCTCCAGATCTTCTCGCCGGAATAAAGTACTGTTTGGTCAATTACAGCATAGAAGAGCTCAAGATGGCCACAAAAAATTTCCATGAAGAAACCAAGAAAAGTGGTTCAATCTATAAGGGGCTAATCACCAATCTTGAGGTGATGATCAAGAGAATGAGATTCGAAGACACACGCCGGGTAATTGATTTTCATTCTAAGATCAACCACATCAATATTGTGAATTTACGTGGTGTTTGTTATGATGAGAGTGATTTATCATGGTCATATTTGGTCTTTGAGTGGCCTAAAAATGGGTGCTTAAGGGACTGTTTATCTGATGGATCCAACCTTCTCTGTTGGAAACAGAGGACACAAATAGCTTTTGACATAGCCACAGTTCTTCACTATTTACACTGTTGTGCTTTTCCTTCTTATGCTCATTTGAATGTTAGCAGTAGAAATATATTTATCACAGAAGACTTTAGAGGGAAACTAGCAGATATTGCTGCACCAGAGAACCATGCTAGAGGTCTAGTTTCTGAGAAAGTTGACATTTTTGCATTTGGGGTTGTGTTACTTGAAATGGTCTCTGCAAGAGAGAATATTGAAGGGAAATTAGTGAAAGATTCTGTGGGGTTTTTGGGGGGAGAAGGAAGAGGAAATGAAGGCGGTTGCTTTGAAGGGTTGAGGAGTTTCATGGATCCTAATTTGAAGGAAGATTATCATCTTGCAGAGGCTTTGTGTTTAGCTGTTTTAGCAAAGGCTTGTGTAGCTGATGATCCCTTGCACAGACCAACCATGGATGATATCATGAAGGTCCTTGCAAAAATGGTTTCTCCACAACAGCCAGAGAAATAA 1869 0.4007 MLHDSITRAFTANPKRKEKSNLDIMIYPWFIALLCIISSSSAHQFYDSTNCSTDPDTFPGSRYTCKTPQDPCQTYLVFRSNQRFQKISEISKLFHKNPYKLLQENNHLNLNSSSQFIETGKEVLIPVTCTCSGGFYQVSSRYVVPENTTFSEIACGVYEGLLKSSTLEQDNLNTTRAGDELNVPLRCACPDNSTSIGKKLKYLITYPIILEDSDSYISAKFGISEEDFREVNDLHPFSTLFEQTTVLIPLRDGTIKISDIPESSPAPTSGFLPTLPVAKTRKNRTSLYIASSVIGSLMLIMAILVGVLYFKALRKWKSESVRPLTPSTSVVMSPMRGSSTTSCLSPDLLAGIKYCLVNYSIEELKMATKNFHEETKKSGSIYKGLITNLEVMIKRMRFEDTRRVIDFHSKINHINIVNLRGVCYDESDLSWSYLVFEWPKNGCLRDCLSDGSNLLCWKQRTQIAFDIATVLHYLHCCAFPSYAHLNVSSRNIFITEDFRGKLADIAAPENHARGLVSEKVDIFAFGVVLLEMVSARENIEGKLVKDSVGFLGGEGRGNEGGCFEGLRSFMDPNLKEDYHLAEALCLAVLAKACVADDPLHRPTMDDIMKVLAKMVSPQQPEK 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0304 622 Gene3D Transferase(Phosphotransferase) domain 1 506 621 - -
Acco08g0304 622 Gene3D Transferase(Phosphotransferase) domain 1 375 505 - -
Acco08g0304 622 Pfam Protein tyrosine and serine/threonine kinase 389 505 IPR001245 GO:0004672|GO:0006468
Acco08g0304 622 ProSiteProfiles LysM domain profile. 204 248 IPR018392 -
Acco08g0304 622 SUPERFAMILY Protein kinase-like (PK-like) 357 611 IPR011009 -
Acco08g0304 622 ProSiteProfiles Protein kinase domain profile. 328 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0304 622 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 33 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0304 Acco-ChrAcco08 2338825 2342554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0304 33 619 Receptor kinase-like Gene Family AT2G23770 30.189 1.24e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco08g0304 PK_Tyr_Ser-Thr 9.1e-13 CL0016