Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0301 ATGGCTGGGAACGACAAGAGGATGAAGGAGAATAATAGGGCCGATGATCCGTTGAGGTGGCGGGAAGCAGTGGAGTTGACGAGGGGGAGCCACGTGGAGGAAGTGAAGGGCATGGTGAGAGATTACCGGAGGAAGGTGGTGACAGTGGGAGGGGAAACCTTGACGGTGGGGCAGGTGGCGGCGGTGGCGGAGGCGACAACCAAGGTGGAGCTGGAGGAGAGCAAGAGGGAGGGAGTGGAGGCCAGCAGCGCGTGGGTAATTGAGAGCGTTAAAAAAGGGGTAGACAGTTACGGAGTGACGACGGGGTTTGGTGCCACGTCGCACCGGAGAACCGGCCGAGGGGTGGCGCTGCAAGCTGAGCTCGTAAGGTTTTTGAATGCGGGAATATTTGGAAACGGAACAGAAGCTGGCCAAACCCTGCCGGCAAGTGCATCAAGAGCGGCGATGCTGGTCAGAATCAACACGCTCCTTCAAGGTTACTCCGGCATCAGATATAACATTCTTGAAGCCATTGCCAAATTACTCAACCATGGCATTACTCCATGTTTGCCCTTGCGTGGTTCCATTTCAGCCTCAGGTGACTTAGTCCCATTTTCATACCTCGCCGCACTTTTGACTGGAAGGACTAATTCAAAAGCCATTGGCCCCGACGGCGAGTCATTGACTCCCTCGGAAGCCTTCCGCTTAGCCTCTATCCATGAAGGCTTCTTTGAGTTGCAGCCTAAGGAAGGTCTTGCACTTGTTAATGGAACTGGGGTTGGTGCTGGATTAGCTTCCATGGTTCTTTTTGAGGCCAACATTTTAACTGTTTTATCTGTAGTGATGTCTGCAATTTTCGCTGAAGTAATGCACGCAAAGCCGGAGTTTACAGATCATTTGACACACAGATTAAAGCATCATCCTGGGCAGATTGAAGCAGCAGCAACAATGGAACACATTTTGGATGGAAGTGCTTATGTTAAAGCAGCGAAAAAGTTGCATGAGATTGATCCTTTCCAAAAGCCTAAGCAAGATAGATATGCCCTTAGAACTTCACCTCAATGGCTGGGTCCTCAGATTGAAGTTATCAGGTCATCAACAAAATCTATAGAGAGAGAGATCAACTCTGTGAATGATAACCCTTTGATTGATGTATCAAGGAACAAAGTTCTTCATGGTGGCAATTTCCAGGGCACCCCAGTTGGTGTTTCCATGGACAACACAAGACTAGCTCTGGCTGCTATTGGGAAGCTCCTTTTTGCTCAAATGTCTGAGCTGGTTAATGATTTTTACAACAATGGCTTGCCTTCAAATCTTTCTGGAGGACGTTGTCCAAGCTTGGATTATGGATTCAAAGGTGCTGAAATAGCAATGGCTTCATATTGTTCTGAGCTTCAGTATCTGGGAAACCCAGTCACTAATCATGTCCAAAGTGCAGAACAGCACAATCAAGATGTGAACTCATTAGGATTAATCTCTGCAAGGAAAACAGCTGAAGCAATTGAAATATTGAAGCTCATGACTTCAACCTACTTGGTTGCTCTGTGTCAAGCCATAGATTTGAGGCATTTGGAGGATAACTTGAAGAACACGGTTAAGAAAACAGTTAGCCAAGTGGCTAAAAAGGTACTAACTGTGGGTGTTGATGGGGAGCTTCGTCCTTCAAGATTTTTTGAGAAAGATTTGCTCAAAGTGGTTGATCTGGAAGATGTTTTTGGATATATTGATGACCCCTGTAATGTGACTTATCCTCTGATTGAAAAGCTAAGGCGTGTTCTTGTGGAACATGCATTAATGCCGACTAATAATGATGGTTTGGAAAGTGGATATGCTTCCATATTCCTCAAGATTGTTGCCTTTGAAGAGGAACTGAAGGCAGTGTTGCCCAACGAGGTTGAATCTACAAGAAATGATTTTGAGAAGGGCATTTCAGCAATTCCAAACAAGATTAAAGATTGCAGGTCCTATCCAATTTACAAGTTTGTGAGGGAAGAGTTGGGGACGCAGTTTTTAACCGGAGACAAAAGTCGATCACCAGGAGAAGATTTTGATAAAGTTTTCACTGCAATTAGTGAACGAAAGTTGGTTGATCCAATGTTTGAATGCTTAAAGGATTGGGACTATGCACCTCTTCCATTATGTTAA 2124 0.4562 MAGNDKRMKENNRADDPLRWREAVELTRGSHVEEVKGMVRDYRRKVVTVGGETLTVGQVAAVAEATTKVELEESKREGVEASSAWVIESVKKGVDSYGVTTGFGATSHRRTGRGVALQAELVRFLNAGIFGNGTEAGQTLPASASRAAMLVRINTLLQGYSGIRYNILEAIAKLLNHGITPCLPLRGSISASGDLVPFSYLAALLTGRTNSKAIGPDGESLTPSEAFRLASIHEGFFELQPKEGLALVNGTGVGAGLASMVLFEANILTVLSVVMSAIFAEVMHAKPEFTDHLTHRLKHHPGQIEAAATMEHILDGSAYVKAAKKLHEIDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKVLHGGNFQGTPVGVSMDNTRLALAAIGKLLFAQMSELVNDFYNNGLPSNLSGGRCPSLDYGFKGAEIAMASYCSELQYLGNPVTNHVQSAEQHNQDVNSLGLISARKTAEAIEILKLMTSTYLVALCQAIDLRHLEDNLKNTVKKTVSQVAKKVLTVGVDGELRPSRFFEKDLLKVVDLEDVFGYIDDPCNVTYPLIEKLRRVLVEHALMPTNNDGLESGYASIFLKIVAFEEELKAVLPNEVESTRNDFEKGISAIPNKIKDCRSYPIYKFVREELGTQFLTGDKSRSPGEDFDKVFTAISERKLVDPMFECLKDWDYAPLPLC 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0301 707 FunFam Phenylalanine ammonia-lyase 252 544 - -
Acco08g0301 707 Gene3D - 7 251 IPR024083 -
Acco08g0301 707 FunFam Phenylalanine ammonia-lyase 518 641 - -
Acco08g0301 707 Gene3D - 518 641 IPR023144 -
Acco08g0301 707 CDD PAL-HAL 52 515 IPR001106 -
Acco08g0301 707 PANTHER HISTIDINE AMMONIA-LYASE 12 707 IPR001106 -
Acco08g0301 707 SUPERFAMILY L-aspartase-like 16 707 IPR008948 GO:0003824
Acco08g0301 707 FunFam Phenylalanine ammonia-lyase 7 251 - -
Acco08g0301 707 NCBIfam phenylalanine ammonia-lyase 16 697 IPR005922 GO:0005737|GO:0006559|GO:0016841
Acco08g0301 707 Gene3D Fumarase/aspartase (Central domain) 253 700 - -
Acco08g0301 707 Pfam Aromatic amino acid lyase 54 529 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0301 Acco-ChrAcco08 2299581 2302736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0301 14 707 Monolignol Biosynthesis Gene Families AT2G37040 74.138 0.0 1096