Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0297 ATGTTTGCAATTTTTTTCTCTAATAAACACATTATAAACCTGAAAATTGTACCCAAAGTTCGTCCCAGGTTGGATTGTATCCATAGTGGATCAAATGTTTCCAACAACGCACAATCATTTTCGCTTACTGATATAGGGTGGCTTATTGTGCCAATTCACAGAACTTCCAAAATCGCCCAGCAATCATCATCTCCAACAAATTGCTTTCCTACTTTAGTTGCAGCTTTCTTTAGCGGGGACCTTGTCACTGTCGGCAAGCCTAGTCATCTTGGAAATTGTGATGGGTTCCCTGTCTTGCTTTATCATGATATTAATGCCGGGTCATATGTTTCCGTTGGCTTGCTTGAAGTTGTTCTCTCTTTTGTAATTTGCTTGATCTTGCTTCGATGCTCACTTTGTGATCAACAATCTGATACTTCTAGCCATAGCAAGTGGGAATGTAGATGTTCTTTCCAAGGGAACCAGGATTCTATTACCAACTGTTCTTCGTCCTGCAATTGTCGCTCAGATGCGAAAGAGAGTGAGTCTATATGGACTTGCATATGTGATCCCAACGGGTTTCCTAAAGTGGCAGAAGATGGCCAGAGTCCTAGTTGCTTTACTGCCTGCAACTGCACCTGGGGATCTCTCAACATGTCACAAGGTTCAAAGAAACACACATCCAGCAGGATTATAGTAATCATTCTGTTAGTATGCGTTGTATGTACAACTATTGCATTGTTTGCCTCTTTCACATGCTATGTCTGCTGGAAGGACCGATGTCCAATTCAACCGCCAGTATTCTCTTCAGATAAGGAAACAAGTTGCAATAGTACCACCAACTTAATTAGTAACAGGACTTCATCAGTGATAGAAACAAAAATTGCCATAAATTCTCCCATTAATAATGTTACAGGGTGCTTTAAGAAGGCCTCTTTCTTATTTGGGGGCAGAATAGAGACTTTTCAAGGCAAAATTATTCAGTTTTCTTTTGCTGAATTGGAAAATGCAACTGAAAACTTTTCAGCTTCTAATCTTATTGGACTAGGTGGAAGTAGCTATGTATATCGTGGTCAGCTGAAAGATGGTAGTAATGTGGCAGTTAAGCGACTAAAATCTCATGGAGGGCCTGAAGCGGATTCTGTATTTTTGACTGAGATTGAACTGTTATCTAGACTCCACCATTGCCATCTTGTACCTTTACTTGGATACTGTTCAGAACTAAGAGGGAAACATGTTGAAAGGCTACTAGTATTTGAGTACATGGCAAATGGCAATTTGAGGGACTGTTTGGATGGAGTTTCGGGAGAAATTATGGATTGGGCTACTCGGGTTACAATTGCAATAGGAACTGCAAGAGGCTTGGAATATCTCCATGAGGCGGCTGCTCCAAGAATTCTGCACAGGGATGTCAAATCAACTAATATTCTTCTGGATGAAAATTGGCAGGCAAAAATAACTGACCTTGGCTTGGCTAAAAACTTGAGAGTAGATGATCCCCAAAGCTGTTCAAATTCTCCAGCAAGAATGCAGGGGACGTTTGGCTATTTTGCCCCTGAGTATGCAATATTTGGAAGAGCCTCTCCCAAGTCTGATGTCTTCAGTTTTGGTGTGGTTCTTCTTGAGCTCGTGAGTGGTCGGCAACCAATTCATAAATCTACAGGCAAAGAAGAAAGCCTAGTCATATGGGCTACACCTCGGTTGCAAGATGGCAAGCGAGTAAGAACAGAGTTGGTCGATCCACTTTTGAATGGAAACTTCCCCGAAGAAGAGGCGCAGATAATGGCATATTTGGCAAAGGAGTGTTTGCTGTTGGATCCTGATGCTAGGCCAACCATGAGTGAAGTTGTTCAAATTCTTTCAACAATATCACCAGATAAATCTAGGAGGAGAATCAACATTCCAGTGCGCCTTTTTCAGGAACCTCAGGATGCAGAGAAACAAATGCAAGCTCCATCTAGTGAATCTTCAGATAAAAGTTCATTGCCATTAGGTGTTAACCTCAATATGATTGTTGGGAACAAAAATGAAGAAGTAGAAACAGTTTCATCTGAGTATATGGAGAGGTTGATCCTCGTGACTACTAAAAAAGAGGGTTGGCCTGGATCAGATGATGAAACCGTGGACCTAACCGAGCCTCGGTTCGAATCATTTTGCCTGACAAACAGCAGTTCTCCTTGA 2160 0.4162 MFAIFFSNKHIINLKIVPKVRPRLDCIHSGSNVSNNAQSFSLTDIGWLIVPIHRTSKIAQQSSSPTNCFPTLVAAFFSGDLVTVGKPSHLGNCDGFPVLLYHDINAGSYVSVGLLEVVLSFVICLILLRCSLCDQQSDTSSHSKWECRCSFQGNQDSITNCSSSCNCRSDAKESESIWTCICDPNGFPKVAEDGQSPSCFTACNCTWGSLNMSQGSKKHTSSRIIVIILLVCVVCTTIALFASFTCYVCWKDRCPIQPPVFSSDKETSCNSTTNLISNRTSSVIETKIAINSPINNVTGCFKKASFLFGGRIETFQGKIIQFSFAELENATENFSASNLIGLGGSSYVYRGQLKDGSNVAVKRLKSHGGPEADSVFLTEIELLSRLHHCHLVPLLGYCSELRGKHVERLLVFEYMANGNLRDCLDGVSGEIMDWATRVTIAIGTARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGLAKNLRVDDPQSCSNSPARMQGTFGYFAPEYAIFGRASPKSDVFSFGVVLLELVSGRQPIHKSTGKEESLVIWATPRLQDGKRVRTELVDPLLNGNFPEEEAQIMAYLAKECLLLDPDARPTMSEVVQILSTISPDKSRRRINIPVRLFQEPQDAEKQMQAPSSESSDKSSLPLGVNLNMIVGNKNEEVETVSSEYMERLILVTTKKEGWPGSDDETVDLTEPRFESFCLTNSSSP 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0297 719 FunFam receptor-like serine/threonine-protein kinase NCRK 308 414 - -
Acco08g0297 719 Gene3D Transferase(Phosphotransferase) domain 1 415 630 - -
Acco08g0297 719 PANTHER OS01G0750732 PROTEIN 137 643 - -
Acco08g0297 719 MobiDBLite consensus disorder prediction 630 656 - -
Acco08g0297 719 SMART serkin_6 334 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0297 719 CDD STKc_IRAK 340 613 - -
Acco08g0297 719 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Acco08g0297 719 Pfam Protein kinase domain 337 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0297 719 MobiDBLite consensus disorder prediction 639 656 - -
Acco08g0297 719 Gene3D Phosphorylase Kinase; domain 1 310 414 - -
Acco08g0297 719 FunFam receptor-like serine/threonine-protein kinase NCRK 415 625 - -
Acco08g0297 719 SUPERFAMILY Protein kinase-like (PK-like) 315 613 IPR011009 -
Acco08g0297 719 ProSiteProfiles Protein kinase domain profile. 334 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0297 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0297 Acco-ChrAcco08 2265052 2272764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0297 115 715 Receptor kinase-like Gene Family AT2G28250 53.542 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Acco08g0297 Pkinase 7.7e-44 CL0016