Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0294 ATGGGCTTTGGAAGCACAAGATCTGTAAGATTTCAAGATGATCTTGAACAAGCAAGAATCCCCGCGACTAACGGCGACAACGGGATGAAAGTCAAATACAACATTGATGGAGTACAAATACCAGATCCTAGCAGCACCAAAATGGCTCAAAAGACGGAGACAGGGAAGACTACTGCTGGAAAGTTCTTGAAAGGAAGAGTATTGTCAAGAGTATTCTCAGAGGACTATGAAAGAGTGAAAAGAAAGATACTAGATCCTAGAGGACGAACCATTCACAGATGGAACAAGATTTTCTTGGTGGCATGTTTGATATCTTTATTTGTGGACCCTCTATTCTTTTACTTGCCAGTAGCTAGAGGTGAAGTGTGCATTGAGATTGGAGTAACACTTGAAGTTATCCTCACAATCATCAGAACAGTTGCAGATTTCTTTTACATGTTTCAAATTTTCATGAAGTTTCGTACAGCTTATGTCGCGCCTTCCTCTCGAGTATTTGGGAGAGGAGAACTTGTTATTGATTCCTCTAAGATTGCTTTTAGGTACTTCAGAAAGAGTTTTTGGTTAGACTTTGTTGCTGCCCTGCCCCTTCCACAGGTGTTGATTTGGCTTATCATTCCCTTCCTCAGGGGTTCTACAATGGCAAACACAAAAAATGTCCTTCGTTTCACCATCATTTTACAATATCTGCCTAGGCTGTTTCTTATTTTCCCACTTTCATCACAAATTGTGAAGGCTACAGGAGTTGTGACAGAAACAGCATGGGCTGGTGCTGCTTACAACCTTATCCTTTATATGTTGGCAAGCCATGGTTTAGGTGCTATTTGGTACCTTCTATCAATTGAGCGGCAGGAAGCATGCTGGAGAAGTGTGTGTGATCAGGAAAAGTCAAGTTGTCAATATGGATATTTTGACTGCCACCGGGTCAACGATGCCAGTCGGGTCGCCTGGTTCGTTGCAAGTAATGTCACAAAGTTATGCTCACCTGATGTCAGCTTTTATCCATTTGGCATGTACGGTGATGCAGTGACTTCTCAAGTCACAAGCTCACCATTCTTTAACAAGTATTTCTACTGTCTTTGGTGGGGCTTAAGAAATCTGAGTTCTCTGGGACAAAATCTTCTCACGAGCACTTTTGTTGGAGAAATAATGTTTGCCATCATAGTTGGGACCCTGGGATTGGTTCTTTTTGCCTTGCTTATCGGTAATATGCAGACATACCTTCAATCAACAACCGTCCGATTAGAAGAGTGGAGAGTCAAAAGAACTGATATAGAACAATGGATGCATCACAGGCAGCTACCTTCAGAACTAAAACAAGCTGTAAGAAAATATGATCAATATAAATGGTTGGCCACCCGAGGAGTTGATGAAGAGACTCTTCTTAAAGGACTTCCAGTTGATCTTCGAAGAGACATCAAGCGCCACCTTTGCCTCGATCTTGTCCGAGGAGTTCCATTGTTTGATGAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTGAAGCCAGCATTGTGCACAGAGGGAACTTACCTTGTTCGTGAGGGTGATCCGGTGAATGAGATGCTCTTCATAATAAGAGGCCATCTGGATTCGTACACCACCAATGGAGGCCGAGCCGGGTTCTTCAATTCATGCCGGATTGGACCGGGTGATTTCTGCGGCGAAGAAATACTGACATGGGCATTGGACCCTAGACCGAGTGTCATACTTCCATCTTCCACAAGAACAGTGAAAGCCATCTCTGAAGTAGAAGCCTTTGCACTCATGTCAGAAGACCTCAAGTTTGTGGCTTCTCAGTTCAGAAGACTACACAGTAAACAGCTAAGGCACAAGTTCAAGTTTTACTCACACCAATGGAGAACATGGGCTGCTTGTTTCATCCAAACTGCATGGAGAAGGTACAAAAAAAGGAAACTCAGAGCTAAACTGAACCAAACTGATACTGAGCCCGAAACACCAGGGCATAGCCCATCAGGCTTTGTTGTATATGAATCAAGGATGGTTGGGAGCACTGGAAAAGGGATTAATATGCATTCTGGGACAGTTTCTGGTGTTGTAAGCTCTCTTCAGAAGCCTGAAGAGCCAGATTTTACCGTTGATGAGTAA 2112 0.4323 MGFGSTRSVRFQDDLEQARIPATNGDNGMKVKYNIDGVQIPDPSSTKMAQKTETGKTTAGKFLKGRVLSRVFSEDYERVKRKILDPRGRTIHRWNKIFLVACLISLFVDPLFFYLPVARGEVCIEIGVTLEVILTIIRTVADFFYMFQIFMKFRTAYVAPSSRVFGRGELVIDSSKIAFRYFRKSFWLDFVAALPLPQVLIWLIIPFLRGSTMANTKNVLRFTIILQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLILYMLASHGLGAIWYLLSIERQEACWRSVCDQEKSSCQYGYFDCHRVNDASRVAWFVASNVTKLCSPDVSFYPFGMYGDAVTSQVTSSPFFNKYFYCLWWGLRNLSSLGQNLLTSTFVGEIMFAIIVGTLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDIEQWMHHRQLPSELKQAVRKYDQYKWLATRGVDEETLLKGLPVDLRRDIKRHLCLDLVRGVPLFDEMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCRIGPGDFCGEEILTWALDPRPSVILPSSTRTVKAISEVEAFALMSEDLKFVASQFRRLHSKQLRHKFKFYSHQWRTWAACFIQTAWRRYKKRKLRAKLNQTDTEPETPGHSPSGFVVYESRMVGSTGKGINMHSGTVSGVVSSLQKPEEPDFTVDE 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0294 703 SMART cnmp_10 486 617 IPR000595 -
Acco08g0294 703 ProSiteProfiles cAMP/cGMP binding motif profile. 486 583 IPR000595 -
Acco08g0294 703 FunFam Cyclic nucleotide-gated ion channel 1 484 602 - -
Acco08g0294 703 PRINTS EAG/ELK/ERG potassium channel family signature 399 408 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco08g0294 703 PRINTS EAG/ELK/ERG potassium channel family signature 266 276 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco08g0294 703 PRINTS EAG/ELK/ERG potassium channel family signature 449 456 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco08g0294 703 PRINTS EAG/ELK/ERG potassium channel family signature 149 158 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco08g0294 703 PRINTS EAG/ELK/ERG potassium channel family signature 355 372 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco08g0294 703 PRINTS EAG/ELK/ERG potassium channel family signature 381 392 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco08g0294 703 FunFam Cyclic nucleotide-gated ion channel 1 413 477 - -
Acco08g0294 703 Pfam Ion transport protein 94 413 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco08g0294 703 CDD CAP_ED 486 617 IPR000595 -
Acco08g0294 703 SUPERFAMILY Voltage-gated potassium channels 85 408 - -
Acco08g0294 703 Gene3D Helix hairpin bin 413 477 - -
Acco08g0294 703 Gene3D Jelly Rolls 484 604 IPR014710 -
Acco08g0294 703 SUPERFAMILY cAMP-binding domain-like 415 611 IPR018490 -
Acco08g0294 703 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 75 699 - -
Acco08g0294 703 Gene3D - 96 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0294 Acco-ChrAcco08 2246385 2249813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0294 58 702 Ion Channels AT2G28260 75.349 0.0 1010