Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0275 ATGACGAAGGACGTGGAGGTGCAAGAACAAGGAGAGTTCTCGGCAAAGGACTACGTCGAGCCACCGCCGGCGCCGTTGATCGACCCAGAGGAGTTGGGGAAGTGGTCCTTTTACAGGGCGTTGATAGCGGAGTTTGTGGCGACCCTGCTTTTTCTGTACGTAACTGTGTTGACGATTATTGGCTACAATAGCTCCACGGACGCTACAAAGGGTACCGGCGCCACTGCTTGTGACGGCGTCGGTATCTTGGGCATCGCCTGGGCCTTCGGTGGCATGATCTTCATCCTCGTTTACTGCACCGCCGGTATCTCTGGAGGACACATAAACCCGGCGGTGACATTCGGGCTGTTCTTGGGGCGGAAGGTGTCGCTGATAAGAGCGGTCTTGTACATGGTGGCACAGTGCGCCGGAGCAATCTGCGGTACCGGACTTGCCAAGGCCTTCCAAAAAGCCTACTACGACCGGTACGGCGGCGGTGTCAACTTCGTCCAGCCCGGCTACAGCAGGGGCACCGCCTTGGGCGCCGAGATCATCGGCACCTTCGTCCTTGTCTACACCGTCTTCGCCGCCACCGATCCCAAACGCAACGCCCGTGACTCCCATGTTCCTGTGTTGGCTCCACTTCCCATTGGATTCGCTGTGTTCATGGTTCACTTGGCTACAATTCCGGTCACCGGCACCGGTATCAACCCTGCAAGGAGTTTCGGAGCTGCTGTAATCTACAACGGTGACAAAGCCTGGGATGATCATTGGATTTTCTGGGTTGGCCCAGCAATTGGAGCCTTTGCTGCTGCCGTATACCACCAGTATATCCTCAGAGCTGGGGCCATTAAAGCTCTTGGATCCTTCAGGAGCAACAACTAA 864 0.5648 MTKDVEVQEQGEFSAKDYVEPPPAPLIDPEELGKWSFYRALIAEFVATLLFLYVTVLTIIGYNSSTDATKGTGATACDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRAVLYMVAQCAGAICGTGLAKAFQKAYYDRYGGGVNFVQPGYSRGTALGAEIIGTFVLVYTVFAATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIYNGDKAWDDHWIFWVGPAIGAFAAAVYHQYILRAGAIKALGSFRSNN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0275 287 ProSitePatterns MIP family signature. 107 115 IPR022357 -
Acco08g0275 287 SUPERFAMILY Aquaporin-like 31 273 IPR023271 -
Acco08g0275 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 276 IPR034294 -
Acco08g0275 287 CDD MIP 39 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0275 287 NCBIfam MIP family channel protein 43 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0275 287 Gene3D Glycerol uptake facilitator protein. 24 287 IPR023271 -
Acco08g0275 287 FunFam Probable aquaporin PIP1-2 24 287 - -
Acco08g0275 287 Pfam Major intrinsic protein 32 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0275 287 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0275 287 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0275 287 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0275 287 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0275 287 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco08g0275 287 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0275 Acco-ChrAcco08 2059496 2061449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0275 1 285 Major Intrinsic Protein MIP AT5G60660 77.895 7.09e-163 452