Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0267 ATGTTCGAAAAGATTTTCCCTATTGCAATAACGATGGGCTGCTGTGGCTGCTTTGGGTTCATAAGAAAATTCAAACGTTGCAGAAATCAGTCTGGCATGAAGACTAGTATCTCTCAGGAGCCATTGTTGGATGAAACTGAAGACAGAGAAGAAGAAGATGATAACGATGACGATGATAGATCCTATGATGGTAATGTTACTGACACCATTAGTGGAGATGATAGTGAAGTTCCCATTCGTGCCAAACGTTCTGAGGAAATTTTAATGTTGAGAGAAGAGAAAGATATGATTTGTAGGCAGTTTCCTGTTAAGGAAACTCACAAAGTTGTCCGCGCTGAGGATGAAAATGGTAACAAGATGGTAAATGAATATGTTCGGGAGTACAAGATTGGTTCTGGTAGTTATGGGAAAGTGGTTTTGTACCGAAGTTGTGTAGATGGAAAGTATTATGCAATCAAGGCCTTTCACAAGTCTCATCTACAGAAACTTCGAGTTGCACCCTCAGAGACTGCCATGACTGATGTTCTGCGGGAGGTACTCATCATGAAAATGCTGGAACATCCTAACATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCAGATCACTTCTACATGGTACTTGAATATGTAGAAGGCAAATGGGTTTGTGAGGGTTCAGGTCCTTCTTGTAGCTTGGGTGAGGAGACTGCTAGGAAATACTTGCGTGACATAGTTTCAGGATTAAGATATCTTCATGCTCATAATATAGTGCACGGGGATATTAAACCTGATAATTTGTTGGTTACACGACACGGTACAGTAAAGATTGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAACGATGTGCTTCGCCGGTCTCCTGGGACTCCTGTTTTCACTGCCCCAGAATGTTGTTTAGGTCTTACCTATAATGGTAAAGCTGCAGACACGTGGGCTGTTGGAGTTACTTTGTACTGCATGATTTTGGGTGAATACCCATTTCTTGGAGACACACTTCAAGACACGTATGACAAAATAGTCAATAATCCATTAGTGCTCCCAGATGATTTGAATCCCCAAATAAGGAGTTTGTTGGAAGGATTACTTTGTAAAGATCCGAAACATCGGATGACATTGGATGATGTGGCGCAGCATAGCTGGATTATTGGAGATGATGGGCCAATTCCTGAATATTTGTGTTGGTGCAAACGCAAGAGATTAGGAGGAGAAGATTTAAACAGCAACAACCTACTTGCTTGA 1251 0.4157 MFEKIFPIAITMGCCGCFGFIRKFKRCRNQSGMKTSISQEPLLDETEDREEEDDNDDDDRSYDGNVTDTISGDDSEVPIRAKRSEEILMLREEKDMICRQFPVKETHKVVRAEDENGNKMVNEYVREYKIGSGSYGKVVLYRSCVDGKYYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGSGPSCSLGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDVLRRSPGTPVFTAPECCLGLTYNGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDDLNPQIRSLLEGLLCKDPKHRMTLDDVAQHSWIIGDDGPIPEYLCWCKRKRLGGEDLNSNNLLA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0267 416 Gene3D Transferase(Phosphotransferase) domain 1 222 391 - -
Acco08g0267 416 FunFam Serine/threonine-protein kinase GRIK2 114 413 - -
Acco08g0267 416 Pfam Protein kinase domain 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0267 416 CDD STKc_LKB1_CaMKK 130 385 - -
Acco08g0267 416 FunFam Serine/threonine-protein kinase Ssp1 118 220 - -
Acco08g0267 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Acco08g0267 416 SMART serkin_6 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0267 416 MobiDBLite consensus disorder prediction 36 74 - -
Acco08g0267 416 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 64 387 - -
Acco08g0267 416 Gene3D Phosphorylase Kinase; domain 1 118 220 - -
Acco08g0267 416 ProSiteProfiles Protein kinase domain profile. 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g0267 416 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Acco08g0267 416 MobiDBLite consensus disorder prediction 44 61 - -
Acco08g0267 416 SUPERFAMILY Protein kinase-like (PK-like) 116 397 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0267 Acco-ChrAcco08 1988038 1992392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0267 119 392 CBL-interacting serine-threonine protein kinases AT5G35410 32.482 6.31e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Acco08g0267 Pkinase 8.2e-59 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g0267 08 1988038 1992392 Acco08g0267 08 1988038 1992392 ECH