Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0263 ATGTACCTTAACAACCAGAGGAATGTTGTAGTTATGTGCAGTGGTTGGGAATCAGACCCGGGGTATTGTTGTGGAAGACAACCAGAACCAACAACTGTGTTTAATATGTTTGAATCTTCAATCTGTGTTTTTGTGTGGGTTTTGGTGTTTGGTTCTCTGGGAAACCTGAAAAAGGCCATGAGAACGACACAGATACTGTTCCTTTTCTTTTGGTTCATAGGCGTTCAAGCCTATACGTCGTTTTGCGTCAATGTCACGTACGACCACCGTGCATTGGTCATCGACAGCAAGCGCCGTCTCCTCATCTCTGGTTCTATTCATTATCCTCGCAGTACTCCAGAGATGTGGCCGGACCTTATTCAGAAATCGAAAGATGGAGGACTCAATGTGATTGAAACCTACGTCTTCTGGAACAAGCACGAACCTGTGCGAGGCCAGATTGAAAATGAGTATGGTAATGGTGACATTGAGCCTCGCTATGGTCCTGCTGCTAAACCTTACGTCAAGTGGGCAGCTTCAATGGCCATATCACTCAACACAGGAGTGCCCTGGGTCATGTGCCATCAAGATGATGCTCCTGACCCCATTATTAACACTTGCAATGGATTTTACTGTGATCAATTCACACCAAATTCTAACCAGAAACCAAAGTTTTGGACTGAGGGTTATAGTGGATGGCTTGGATCATTTGGTGCTGCGGTTCCCTACAGACCTGTAGAAGATCTTGCATTTGCCGTGGCGCGGTTTTTCCAACGAGGTGGAACATTACAAAATTATTATATGTACCATGGTGGGACCAACTTTGGCCGAACCTCTGGCGCACCATTCATTTCTACAAGTTATGATTATGATGCACCAATCGATGAGTATGGAATTGTGAGACAGCCTAAGTGGGGGCACCTCAAAGATGTGCATAAAGCCATAATGCTCTGTGAAGAAGCATTGCTAGCCACTGATCCCCAAATTAAATCACTTGGTCCGAATCTAGAGGCTGCAGTTTACCAGGCAGGATCTACATGTGCTGCCTTTCTTGCCAACGTGGGCACCTCATCTGACGCAACAGTAAATTTCAATGGCAATTCATATCACTTGCCGGCTTGGTCTGTGAGCATCTTACCAGACTGCGAGAATGTAGTGCTCAATACTGCAAAGGTTAATTCTCAATCTACCATTTCAACCTTTACAAGAGAAATTTCCAAAGAAGACAGTAATTCTTTAGAGGGTTCTAGATCTGGATGGAGTTGGACAAGTGAACCAGTAGGTATTTCAAAAGGTGATGCATTCTCAAAAGTTGGATTACTGGAGCAAATAAATACAACAGCAGACAGAAGTGACTACTTATGGTACTCATTGAGCATTGATCTTGATGATGGTGGTGACCATCAAGCTGTCCTTCACATCGAATCACTTGGCCATGTCGTTCATGCATTTATCAATGGGAAGCTTGCAGGGAGCGGAGTTCGTGATGCTGCCAAAAAGTTGGACGTTCCTGTCACTCTTGTAGCGGGGAAGAACATAATTGATCTCCTGAGTCTAACTGTGGGACTTCAGAATTATGGAGCCTTTTTTGACACATGGGGTGCTGGAATAACTGGCCCAGTTAGATTGAACGGTTTGAAAAATGGGAGCTCTCTTGATCTCTCCTGCCAGCAGTGGACATATCAGGTTGGTCTTCAGGGTGAAGAATTAGGTCTTTCTGATGGATCTGGAAAATGGAACTCGGAGTCTACCCTACCAAAGAATCAACCATTGGTTTGGTACAAGACAAACTTTGCTGCTCCTTCTGGCAATAACCCAGTAGCAATTGACTTCACGGGTATGGGTAAAGGTGAGGCTTGGGTAAACGGACAAAGCATCGGTCGCTTCTGGCCCACATATATTTCTCCAAAGAGTGGTTGCAATGACGCATGTGATTACAGAGGGTCTTATAATTACGACAAATGTCTCAAAAATTGTGGAAAGCCATCACAATCCATATACCATGTACCTCGCTCGTGGTTACGTCCAAGTGGTAACATACTTGTGTTGTTTGAGGAAAATGGAGGTGATCCAACTCAAATAAATTTTGCTACAAGACAGATAGAAAGCCTGTCCGCACATGTTCCAGATTCTCACCCACCACCCGTAGACTCATGGAATACAGACCCAGAATCAGGAAGAAAACTAGGGCCTGCACTTTCACTGGAGTGTCCTAATCCTGATCAGGTTATCTCTTCCATTAAGTTTGCAAGCTTTGGATCTCCCCATGGGACTTGTGGCAACTTCAACCATGGTCAATGCAGCAGCAAGAGAGCACTCTCTATTATACAGAAGGCCTGCGTTGGATCAAGAAGTTGCAATATTGGAGTGTCAATTGATACATTCGGTGATCCATGCAGAGGAGTGGCAAAGAGTTTGGCAGTTGAAGCTGCTTGTACACAATCACGCAGTTCCCACAATTCATTTGCCACAAATATCTAG 2460 0.4459 MYLNNQRNVVVMCSGWESDPGYCCGRQPEPTTVFNMFESSICVFVWVLVFGSLGNLKKAMRTTQILFLFFWFIGVQAYTSFCVNVTYDHRALVIDSKRRLLISGSIHYPRSTPEMWPDLIQKSKDGGLNVIETYVFWNKHEPVRGQIENEYGNGDIEPRYGPAAKPYVKWAASMAISLNTGVPWVMCHQDDAPDPIINTCNGFYCDQFTPNSNQKPKFWTEGYSGWLGSFGAAVPYRPVEDLAFAVARFFQRGGTLQNYYMYHGGTNFGRTSGAPFISTSYDYDAPIDEYGIVRQPKWGHLKDVHKAIMLCEEALLATDPQIKSLGPNLEAAVYQAGSTCAAFLANVGTSSDATVNFNGNSYHLPAWSVSILPDCENVVLNTAKVNSQSTISTFTREISKEDSNSLEGSRSGWSWTSEPVGISKGDAFSKVGLLEQINTTADRSDYLWYSLSIDLDDGGDHQAVLHIESLGHVVHAFINGKLAGSGVRDAAKKLDVPVTLVAGKNIIDLLSLTVGLQNYGAFFDTWGAGITGPVRLNGLKNGSSLDLSCQQWTYQVGLQGEELGLSDGSGKWNSESTLPKNQPLVWYKTNFAAPSGNNPVAIDFTGMGKGEAWVNGQSIGRFWPTYISPKSGCNDACDYRGSYNYDKCLKNCGKPSQSIYHVPRSWLRPSGNILVLFEENGGDPTQINFATRQIESLSAHVPDSHPPPVDSWNTDPESGRKLGPALSLECPNPDQVISSIKFASFGSPHGTCGNFNHGQCSSKRALSIIQKACVGSRSCNIGVSIDTFGDPCRGVAKSLAVEAACTQSRSSHNSFATNI 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0263 819 SUPERFAMILY Galactose-binding domain-like 369 538 IPR008979 -
Acco08g0263 819 Gene3D - 722 812 IPR043159 -
Acco08g0263 819 Pfam Beta-sandwich domain in beta galactosidase 315 385 IPR041392 -
Acco08g0263 819 FunFam Beta-galactosidase 260 387 - -
Acco08g0263 819 PANTHER BETA-GALACTOSIDASE RELATED 77 146 IPR001944 GO:0004553|GO:0005975
Acco08g0263 819 Gene3D Glycosidases 78 146 - -
Acco08g0263 819 ProSiteProfiles SUEL-type lectin domain profile. 720 806 IPR000922 GO:0030246
Acco08g0263 819 Gene3D - 428 554 - -
Acco08g0263 819 SUPERFAMILY (Trans)glycosidases 84 312 IPR017853 -
Acco08g0263 819 CDD Gal_Rha_Lectin_BGal 723 805 - -
Acco08g0263 819 FunFam Beta-galactosidase 717 809 - -
Acco08g0263 819 Pfam Galactose binding lectin domain 728 805 IPR000922 GO:0030246
Acco08g0263 819 PRINTS Glycosyl hydrolase family 35 signature 609 625 IPR001944 GO:0004553|GO:0005975
Acco08g0263 819 PRINTS Glycosyl hydrolase family 35 signature 116 134 IPR001944 GO:0004553|GO:0005975
Acco08g0263 819 PRINTS Glycosyl hydrolase family 35 signature 95 112 IPR001944 GO:0004553|GO:0005975
Acco08g0263 819 PRINTS Glycosyl hydrolase family 35 signature 582 596 IPR001944 GO:0004553|GO:0005975
Acco08g0263 819 Gene3D - 561 699 - -
Acco08g0263 819 Pfam Glycosyl hydrolases family 35 145 307 IPR031330 -
Acco08g0263 819 SUPERFAMILY Galactose-binding domain-like 551 714 IPR008979 -
Acco08g0263 819 Gene3D Glycosidases 147 311 - -
Acco08g0263 819 MobiDBLite consensus disorder prediction 699 720 - -
Acco08g0263 819 FunFam Beta-galactosidase 559 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0263 Acco-ChrAcco08 1965681 1976149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0263 143 659 Glycoside Hydrolase AT2G28470 69.582 0.0 743