Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g0253 ATGATGGACGGAGGGAAGCACGGTGGTGGTGATAGGTGTGATGATAATGGAGACGTCTGCAGAGAAAACATGAGCGTCATCGATATTATCTTCAGGGTCGATTCGATATGCCACAAATACGACAAATACGACATCGATAAGCAGAGAGAGCTCAATGCCTACGGTGACGATGCTTTTGCTCGCCTCTACGCTGCCGTCGAAAGCAACATCGAATCCGCCCTCCATAAATCGGATATTGCTTTTAATGAGACCAACAGGGCATCTGCGGCGGCATTGAACGCGGAAGTTCGTCGGACAAAAGCTCGGCTCATGGACGAAGTCCCTAAGCTTCGTAAACTGGCGCAGAAGAAGGTTAAGGGTCTTCCAAGTGAAGAAATGGCTATTAGGAATGATATGGTTCTGGCGTTGCCAGAAAGGATCCAAGCAATTCCAGATGGCATCACTGGTGCAGCTAATCAAGCTGTAGGAGAAGGGTTTTCACTCTCGTCTCATCAGAATATTAGGTTTGATTCATCAGAAGGATACAAGGACGATCTATATTTCCAACAAACTGAACAATCAAGTCAGTTTAGATCAGAGTTTGAGATGCGAAAAATGAAACAGGATGAAGGGCTTGATATCATATCAGACGGATTGGATACGTTGAAGAATTTGGCCCTTGATATGAATGAGGAAATGGACCGGCAAGTTCCATTAATCGATGAAATTGAGACAAAGGTTGATAAGGCCTCATCCGACCTTAGAAACAACAACACGAGGCTGAGGAAAACTCTCAACGAGGTGAGGTCTAGTCGAAATTTATGCATTGACATCATTCTGCTGTGCGTTCTCCTTGGCATTTTTTCCTACATATACAAGTAA 861 0.446 MMDGGKHGGGDRCDDNGDVCRENMSVIDIIFRVDSICHKYDKYDIDKQRELNAYGDDAFARLYAAVESNIESALHKSDIAFNETNRASAAALNAEVRRTKARLMDEVPKLRKLAQKKVKGLPSEEMAIRNDMVLALPERIQAIPDGITGAANQAVGEGFSLSSHQNIRFDSSEGYKDDLYFQQTEQSSQFRSEFEMRKMKQDEGLDIISDGLDTLKNLALDMNEEMDRQVPLIDEIETKVDKASSDLRNNNTRLRKTLNEVRSSRNLCIDIILLCVLLGIFSYIYK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g0253 286 FunFam Syntaxin 6 202 265 - -
Acco08g0253 286 PANTHER SYNTAXIN 75 274 IPR045242 -
Acco08g0253 286 CDD SNARE_Qc 200 256 - -
Acco08g0253 286 Gene3D - 195 256 - -
Acco08g0253 286 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 195 257 IPR000727 -
Acco08g0253 286 SMART tSNARE_6 190 257 IPR000727 -
Acco08g0253 286 Pfam SNARE domain 232 281 IPR000727 -
Acco08g0253 286 SUPERFAMILY SNARE fusion complex 189 256 - -
Acco08g0253 286 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g0253 Acco-ChrAcco08 1902459 1904726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g0253 24 285 SNARE and Associated Proteins AT3G09740 63.498 2.16e-123 351